Package adams.flow.transformer
Class PredictionEccentricity
- java.lang.Object
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- adams.core.logging.LoggingObject
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- adams.core.logging.CustomLoggingLevelObject
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- adams.core.option.AbstractOptionHandler
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- adams.flow.core.AbstractActor
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- adams.flow.transformer.AbstractTransformer
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- adams.flow.transformer.PredictionEccentricity
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- All Implemented Interfaces:
AdditionalInformationHandler
,CleanUpHandler
,Destroyable
,GlobalInfoSupporter
,LoggingLevelHandler
,LoggingSupporter
,OptionHandler
,QuickInfoSupporter
,ShallowCopySupporter<Actor>
,SizeOfHandler
,Stoppable
,StoppableWithFeedback
,VariablesInspectionHandler
,VariableChangeListener
,Actor
,ErrorHandler
,InputConsumer
,OutputProducer
,Serializable
,Comparable
public class PredictionEccentricity extends AbstractTransformer
Treats the predictions from a regressor as an image and computes the 'eccentricity' of the actual vs predicted plot. Generated values range from 1 to infinity with a value of 1 representing a circular shape.
Projects the predictions onto the specified grid, using the 'actual' for both axes.
For more details see:
https://en.wikipedia.org/wiki/Eccentricity_(mathematics)
Input/output:
- accepts:
adams.data.spreadsheet.SpreadSheet
- generates:
adams.flow.container.PredictionEccentricityContainer
Container information:
- adams.flow.container.PredictionEccentricityContainer: Predictions, Eccentricity, Matrix
-logging-level <OFF|SEVERE|WARNING|INFO|CONFIG|FINE|FINER|FINEST> (property: loggingLevel) The logging level for outputting errors and debugging output. default: WARNING
-name <java.lang.String> (property: name) The name of the actor. default: PredictionEccentricity
-annotation <adams.core.base.BaseAnnotation> (property: annotations) The annotations to attach to this actor. default:
-skip <boolean> (property: skip) If set to true, transformation is skipped and the input token is just forwarded as it is. default: false
-stop-flow-on-error <boolean> (property: stopFlowOnError) If set to true, the flow execution at this level gets stopped in case this actor encounters an error; the error gets propagated; useful for critical actors. default: false
-silent <boolean> (property: silent) If enabled, then no errors are output in the console; Note: the enclosing actor handler must have this enabled as well. default: false
-actual <adams.data.spreadsheet.SpreadSheetColumnIndex> (property: actual) The column with the actual values. default: Actual example: An index is a number starting with 1; column names (case-sensitive) as well as the following placeholders can be used: first, second, third, last_2, last_1, last; numeric indices can be enforced by preceding them with '#' (eg '#12'); column names can be surrounded by double quotes.
-predicted <adams.data.spreadsheet.SpreadSheetColumnIndex> (property: predicted) The column with the predicted values. default: Predicted example: An index is a number starting with 1; column names (case-sensitive) as well as the following placeholders can be used: first, second, third, last_2, last_1, last; numeric indices can be enforced by preceding them with '#' (eg '#12'); column names can be surrounded by double quotes.
-grid <int> (property: grid) The size of the grid to project the predictions onto. default: 100 minimum: 1
-morphology <ERODE|DILATE> [-morphology ...] (property: morphologies) The morphologies to apply. default: DILATE
-num-cycles <int> (property: numCycles) The number of cycles to apply. default: 1 minimum: 0
- Version:
- $Revision$
- Author:
- FracPete (fracpete at waikato dot ac dot nz)
- See Also:
- Serialized Form
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Nested Class Summary
Nested Classes Modifier and Type Class Description static class
PredictionEccentricity.Morphology
Enumeration of morphology cycles.
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Field Summary
Fields Modifier and Type Field Description protected SpreadSheetColumnIndex
m_Actual
the column with the actual values.protected int
m_Grid
the size of the grid.protected PredictionEccentricity.Morphology[]
m_Morphologies
the morphologies to apply.protected int
m_NumCycles
the number of cycles to apply.protected SpreadSheetColumnIndex
m_Predicted
the column with the predicted values.-
Fields inherited from class adams.flow.transformer.AbstractTransformer
BACKUP_INPUT, BACKUP_OUTPUT, m_InputToken, m_OutputToken
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Fields inherited from class adams.flow.core.AbstractActor
m_Annotations, m_BackupState, m_DetectedObjectVariables, m_DetectedVariables, m_ErrorHandler, m_Executed, m_Executing, m_ExecutionListeningSupporter, m_FullName, m_LoggingPrefix, m_Name, m_Parent, m_ScopeHandler, m_Self, m_Silent, m_Skip, m_StopFlowOnError, m_StopMessage, m_Stopped, m_StorageHandler, m_VariablesUpdated
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Fields inherited from class adams.core.option.AbstractOptionHandler
m_OptionManager
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Fields inherited from class adams.core.logging.LoggingObject
m_Logger, m_LoggingIsEnabled, m_LoggingLevel
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Fields inherited from interface adams.flow.core.Actor
FILE_EXTENSION, FILE_EXTENSION_GZ
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Constructor Summary
Constructors Constructor Description PredictionEccentricity()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description Class[]
accepts()
Returns the class that the consumer accepts.String
actualTipText()
Returns the tip text for this property.void
defineOptions()
Adds options to the internal list of options.protected String
doExecute()
Executes the flow item.Class[]
generates()
Returns the class of objects that it generates.SpreadSheetColumnIndex
getActual()
Returns the column with the actual values.int
getGrid()
Returns the grid size.PredictionEccentricity.Morphology[]
getMorphologies()
Returns the morphologies to apply.int
getNumCycles()
Returns the number of cycles to apply.SpreadSheetColumnIndex
getPredicted()
Returns the column with the predicted values.String
getQuickInfo()
Returns a quick info about the actor, which will be displayed in the GUI.String
globalInfo()
Returns a string describing the object.String
gridTipText()
Returns the tip text for this property.String
morphologiesTipText()
Returns the tip text for this property.String
numCyclesTipText()
Returns the tip text for this property.String
predictedTipText()
Returns the tip text for this property.void
setActual(SpreadSheetColumnIndex value)
Sets the column with the actual values.void
setGrid(int value)
Sets the size of the grid.void
setMorphologies(PredictionEccentricity.Morphology[] value)
Sets the morphologies to apply.void
setNumCycles(int value)
Sets the number of cycles to apply.void
setPredicted(SpreadSheetColumnIndex value)
Sets the column with the predicted values.-
Methods inherited from class adams.flow.transformer.AbstractTransformer
backupState, currentInput, execute, hasInput, hasPendingOutput, input, output, postExecute, restoreState, wrapUp
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Methods inherited from class adams.flow.core.AbstractActor
annotationsTipText, canInspectOptions, canPerformSetUpCheck, cleanUp, compareTo, configureLogger, destroy, equals, finalUpdateVariables, findVariables, findVariables, forceVariables, forCommandLine, forName, forName, getAdditionalInformation, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowActors, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSilent, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, handleException, hasErrorHandler, hasStopMessage, index, initialize, isBackedUp, isExecuted, isExecuting, isFinished, isHeadless, isStopped, nameTipText, performSetUpChecks, performVariableChecks, preExecute, pruneBackup, pruneBackup, reset, setAnnotations, setErrorHandler, setName, setParent, setSilent, setSkip, setStopFlowOnError, setUp, setVariables, shallowCopy, shallowCopy, silentTipText, sizeOf, skipTipText, stopExecution, stopExecution, stopFlowOnErrorTipText, updateDetectedVariables, updatePrefix, updateVariables, variableChanged
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Methods inherited from class adams.core.option.AbstractOptionHandler
cleanUpOptions, finishInit, getDefaultLoggingLevel, getOptionManager, loggingLevelTipText, newOptionManager, setLoggingLevel, toCommandLine, toString
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Methods inherited from class adams.core.logging.LoggingObject
getLogger, getLoggingLevel, initializeLogging, isLoggingEnabled
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Methods inherited from class java.lang.Object
clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface adams.flow.core.Actor
cleanUp, compareTo, destroy, equals, findVariables, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSilent, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, hasErrorHandler, hasStopMessage, index, isExecuted, isFinished, isHeadless, isStopped, setAnnotations, setErrorHandler, setName, setParent, setSilent, setSkip, setStopFlowOnError, setUp, setVariables, shallowCopy, shallowCopy, sizeOf, stopExecution, stopExecution, toCommandLine, variableChanged
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Methods inherited from interface adams.core.AdditionalInformationHandler
getAdditionalInformation
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Methods inherited from interface adams.core.logging.LoggingLevelHandler
getLoggingLevel, setLoggingLevel
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Methods inherited from interface adams.core.logging.LoggingSupporter
getLogger, isLoggingEnabled
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Methods inherited from interface adams.core.option.OptionHandler
cleanUpOptions, getOptionManager
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Methods inherited from interface adams.core.VariablesInspectionHandler
canInspectOptions
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Field Detail
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m_Actual
protected SpreadSheetColumnIndex m_Actual
the column with the actual values.
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m_Predicted
protected SpreadSheetColumnIndex m_Predicted
the column with the predicted values.
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m_Grid
protected int m_Grid
the size of the grid.
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m_Morphologies
protected PredictionEccentricity.Morphology[] m_Morphologies
the morphologies to apply.
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m_NumCycles
protected int m_NumCycles
the number of cycles to apply.
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Method Detail
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globalInfo
public String globalInfo()
Returns a string describing the object.- Specified by:
globalInfo
in interfaceGlobalInfoSupporter
- Specified by:
globalInfo
in classAbstractOptionHandler
- Returns:
- a description suitable for displaying in the gui
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defineOptions
public void defineOptions()
Adds options to the internal list of options.- Specified by:
defineOptions
in interfaceOptionHandler
- Overrides:
defineOptions
in classAbstractActor
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getQuickInfo
public String getQuickInfo()
Returns a quick info about the actor, which will be displayed in the GUI.- Specified by:
getQuickInfo
in interfaceActor
- Specified by:
getQuickInfo
in interfaceQuickInfoSupporter
- Overrides:
getQuickInfo
in classAbstractActor
- Returns:
- null if no info available, otherwise short string
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setActual
public void setActual(SpreadSheetColumnIndex value)
Sets the column with the actual values.- Parameters:
value
- the column
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getActual
public SpreadSheetColumnIndex getActual()
Returns the column with the actual values.- Returns:
- the range
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actualTipText
public String actualTipText()
Returns the tip text for this property.- Returns:
- tip text for this property suitable for displaying in the GUI or for listing the options.
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setPredicted
public void setPredicted(SpreadSheetColumnIndex value)
Sets the column with the predicted values.- Parameters:
value
- the column
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getPredicted
public SpreadSheetColumnIndex getPredicted()
Returns the column with the predicted values.- Returns:
- the range
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predictedTipText
public String predictedTipText()
Returns the tip text for this property.- Returns:
- tip text for this property suitable for displaying in the GUI or for listing the options.
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setGrid
public void setGrid(int value)
Sets the size of the grid.- Parameters:
value
- the size
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getGrid
public int getGrid()
Returns the grid size.- Returns:
- the size
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gridTipText
public String gridTipText()
Returns the tip text for this property.- Returns:
- tip text for this property suitable for displaying in the GUI or for listing the options.
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setMorphologies
public void setMorphologies(PredictionEccentricity.Morphology[] value)
Sets the morphologies to apply.- Parameters:
value
- the morphologies
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getMorphologies
public PredictionEccentricity.Morphology[] getMorphologies()
Returns the morphologies to apply.- Returns:
- the morphologies
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morphologiesTipText
public String morphologiesTipText()
Returns the tip text for this property.- Returns:
- tip text for this property suitable for displaying in the GUI or for listing the options.
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setNumCycles
public void setNumCycles(int value)
Sets the number of cycles to apply.- Parameters:
value
- the cycles
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getNumCycles
public int getNumCycles()
Returns the number of cycles to apply.- Returns:
- the cycles
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numCyclesTipText
public String numCyclesTipText()
Returns the tip text for this property.- Returns:
- tip text for this property suitable for displaying in the GUI or for listing the options.
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accepts
public Class[] accepts()
Returns the class that the consumer accepts.- Returns:
- the Class of objects that can be processed
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generates
public Class[] generates()
Returns the class of objects that it generates.- Returns:
- the Class of the generated tokens
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doExecute
protected String doExecute()
Executes the flow item.- Specified by:
doExecute
in classAbstractActor
- Returns:
- null if everything is fine, otherwise error message
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