Package adams.flow.transformer

Class WekaInstancesStatistic

  • All Implemented Interfaces:
    adams.core.AdditionalInformationHandler, adams.core.CleanUpHandler, adams.core.Destroyable, adams.core.GlobalInfoSupporter, adams.core.logging.LoggingLevelHandler, adams.core.logging.LoggingSupporter, adams.core.option.OptionHandler, adams.core.QuickInfoSupporter, adams.core.ShallowCopySupporter<adams.flow.core.Actor>, adams.core.SizeOfHandler, adams.core.Stoppable, adams.core.StoppableWithFeedback, adams.core.VariablesInspectionHandler, adams.event.VariableChangeListener, adams.flow.core.Actor, adams.flow.core.ErrorHandler, adams.flow.core.InputConsumer, adams.flow.core.OutputProducer, Serializable, Comparable
    public class WekaInstancesStatistic
extends adams.flow.transformer.AbstractTransformer
    Generates statistics from a weka.core.Instances object.
    The actor just uses the internal format (double array) and does not check whether the attributes are actually numeric.

    Input/output:
    - accepts:
       weka.core.Instances
    - generates:
       adams.data.spreadsheet.SpreadSheet


    -logging-level <OFF|SEVERE|WARNING|INFO|CONFIG|FINE|FINER|FINEST> (property: loggingLevel)
    The logging level for outputting errors and debugging output.
    default: WARNING
 
    -name <java.lang.String> (property: name)
    The name of the actor.
    default: WekaInstancesStatistic
 
    -annotation <adams.core.base.BaseAnnotation> (property: annotations)
    The annotations to attach to this actor.
    default: 
 
    -skip <boolean> (property: skip)
    If set to true, transformation is skipped and the input token is just forwarded 
    as it is.
    default: false
 
    -stop-flow-on-error <boolean> (property: stopFlowOnError)
    If set to true, the flow execution at this level gets stopped in case this 
    actor encounters an error; the error gets propagated; useful for critical 
    actors.
    default: false
 
    -silent <boolean> (property: silent)
    If enabled, then no errors are output in the console; Note: the enclosing 
    actor handler must have this enabled as well.
    default: false
 
    -type <ROW_BY_INDEX|COLUMN_BY_INDEX|COLUMN_BY_REGEXP> (property: dataType)
    Whether to retrieve rows or columns from the Instances object.
    default: COLUMN_BY_INDEX
 
    -location <adams.core.base.BaseString> [-location ...] (property: locations)
    The locations of the data, depending on the chosen data type that can be 
    either indices, attribute names or regular expressions on the attribute 
    names.
    default: 
 
    -statistic <adams.data.statistics.AbstractArrayStatistic> (property: statistic)
    The statistic to generate from the data.
    default: adams.data.statistics.ArrayMean
    Version:
    $Revision$
    Author:
    fracpete (fracpete at waikato dot ac dot nz)
    See Also:
    Serialized Form

    • Field Summary

      Fields 
      Modifier and Type Field Description
      protected WekaInstancesStatisticDataType m_DataType
      the type of data to get from the Instances object (rows or columns).
      protected adams.core.base.BaseString[] m_Locations
      the array of indices/regular expressions.
      protected adams.data.statistics.AbstractArrayStatistic m_Statistic
      the statistic to generate.

      • Fields inherited from class adams.flow.transformer.AbstractTransformer

        BACKUP_INPUT, BACKUP_OUTPUT, m_InputToken, m_OutputToken

      • Fields inherited from class adams.flow.core.AbstractActor

        m_Annotations, m_BackupState, m_DetectedObjectVariables, m_DetectedVariables, m_ErrorHandler, m_Executed, m_Executing, m_ExecutionListeningSupporter, m_FullName, m_LoggingPrefix, m_Name, m_Parent, m_ScopeHandler, m_Self, m_Silent, m_Skip, m_StopFlowOnError, m_StopMessage, m_Stopped, m_StorageHandler, m_VariablesUpdated

      • Fields inherited from class adams.core.option.AbstractOptionHandler

        m_OptionManager

      • Fields inherited from class adams.core.logging.LoggingObject

        m_Logger, m_LoggingIsEnabled, m_LoggingLevel

      • Fields inherited from interface adams.flow.core.Actor

        FILE_EXTENSION, FILE_EXTENSION_GZ

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      Class[] accepts()
      Returns the class that the consumer accepts.
      String dataTypeTipText()
      Returns the tip text for this property.
      void defineOptions()
      Adds options to the internal list of options.
      protected String doExecute()
      Executes the flow item.
      Class[] generates()
      Returns the class of objects that it generates.
      WekaInstancesStatisticDataType getDataType()
      Returns what type of data to retrieve from the Instances object.
      adams.core.base.BaseString[] getLocations()
      Returns the locations of the data (indices/regular expressions on attribute name).
      String getQuickInfo()
      Returns a quick info about the actor, which will be displayed in the GUI.
      adams.data.statistics.AbstractArrayStatistic getStatistic()
      Returns the statistic in use.
      String globalInfo()
      Returns a string describing the object.
      String locationsTipText()
      Returns the tip text for this property.
      void setDataType​(WekaInstancesStatisticDataType value)
      Sets what type of data to retrieve from the Instances object.
      void setLocations​(adams.core.base.BaseString[] value)
      Sets the locations of the data (indices/regular expressions on attribute name).
      void setStatistic​(adams.data.statistics.AbstractArrayStatistic value)
      Sets the statistic to use.
      String statisticTipText()
      Returns the tip text for this property.

      • Methods inherited from class adams.flow.transformer.AbstractTransformer

        backupState, currentInput, execute, hasInput, hasPendingOutput, input, output, postExecute, restoreState, wrapUp

      • Methods inherited from class adams.flow.core.AbstractActor

        annotationsTipText, canInspectOptions, canPerformSetUpCheck, cleanUp, compareTo, configureLogger, destroy, equals, finalUpdateVariables, findVariables, findVariables, forceVariables, forCommandLine, forName, forName, getAdditionalInformation, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowActors, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSilent, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, handleException, hasErrorHandler, hasStopMessage, index, initialize, isBackedUp, isExecuted, isExecuting, isFinished, isHeadless, isStopped, nameTipText, performSetUpChecks, performVariableChecks, preExecute, pruneBackup, pruneBackup, reset, setAnnotations, setErrorHandler, setName, setParent, setSilent, setSkip, setStopFlowOnError, setUp, setVariables, shallowCopy, shallowCopy, silentTipText, sizeOf, skipTipText, stopExecution, stopExecution, stopFlowOnErrorTipText, updateDetectedVariables, updatePrefix, updateVariables, variableChanged

      • Methods inherited from class adams.core.option.AbstractOptionHandler

        cleanUpOptions, finishInit, getDefaultLoggingLevel, getOptionManager, loggingLevelTipText, newOptionManager, setLoggingLevel, toCommandLine, toString

      • Methods inherited from class adams.core.logging.LoggingObject

        getLogger, getLoggingLevel, initializeLogging, isLoggingEnabled

      • Methods inherited from interface adams.flow.core.Actor

        cleanUp, compareTo, destroy, equals, findVariables, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSilent, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, hasErrorHandler, hasStopMessage, index, isExecuted, isFinished, isHeadless, isStopped, setAnnotations, setErrorHandler, setName, setParent, setSilent, setSkip, setStopFlowOnError, setUp, setVariables, shallowCopy, shallowCopy, sizeOf, stopExecution, stopExecution, toCommandLine, variableChanged

      • Methods inherited from interface adams.core.AdditionalInformationHandler

        getAdditionalInformation

      • Methods inherited from interface adams.core.logging.LoggingLevelHandler

        getLoggingLevel, setLoggingLevel

      • Methods inherited from interface adams.core.logging.LoggingSupporter

        getLogger, isLoggingEnabled

      • Methods inherited from interface adams.core.option.OptionHandler

        cleanUpOptions, getOptionManager

      • Methods inherited from interface adams.core.VariablesInspectionHandler

        canInspectOptions

    • Field Detail

      • m_Locations

        protected adams.core.base.BaseString[] m_Locations
        the array of indices/regular expressions.

      • m_Statistic

        protected adams.data.statistics.AbstractArrayStatistic m_Statistic
        the statistic to generate.

    • Constructor Detail

      • WekaInstancesStatistic

        public WekaInstancesStatistic()

    • Method Detail

      • globalInfo

        public String globalInfo()
        Returns a string describing the object.
        Specified by:
        globalInfo in interface adams.core.GlobalInfoSupporter
        Specified by:
        globalInfo in class adams.core.option.AbstractOptionHandler
        Returns:
        a description suitable for displaying in the gui

      • defineOptions

        public void defineOptions()
        Adds options to the internal list of options.
        Specified by:
        defineOptions in interface adams.core.option.OptionHandler
        Overrides:
        defineOptions in class adams.flow.core.AbstractActor

      • setDataType

        public void setDataType​(WekaInstancesStatisticDataType value)
        Sets what type of data to retrieve from the Instances object.
        Parameters:
        value - the type of conversion

      • getDataType

        public WekaInstancesStatisticDataType getDataType()
        Returns what type of data to retrieve from the Instances object.
        Returns:
        the type of conversion

      • dataTypeTipText

        public String dataTypeTipText()
        Returns the tip text for this property.
        Returns:
        tip text for this property suitable for displaying in the GUI or for listing the options.

      • setLocations

        public void setLocations​(adams.core.base.BaseString[] value)
        Sets the locations of the data (indices/regular expressions on attribute name).
        Parameters:
        value - the locations of the data

      • getLocations

        public adams.core.base.BaseString[] getLocations()
        Returns the locations of the data (indices/regular expressions on attribute name).
        Returns:
        the locations of the data

      • locationsTipText

        public String locationsTipText()
        Returns the tip text for this property.
        Returns:
        tip text for this property suitable for displaying in the GUI or for listing the options.

      • setStatistic

        public void setStatistic​(adams.data.statistics.AbstractArrayStatistic value)
        Sets the statistic to use.
        Parameters:
        value - the statistic

      • getStatistic

        public adams.data.statistics.AbstractArrayStatistic getStatistic()
        Returns the statistic in use.
        Returns:
        the statistic

      • statisticTipText

        public String statisticTipText()
        Returns the tip text for this property.
        Returns:
        tip text for this property suitable for displaying in the GUI or for listing the options.

      • getQuickInfo

        public String getQuickInfo()
        Returns a quick info about the actor, which will be displayed in the GUI.
        Specified by:
        getQuickInfo in interface adams.flow.core.Actor
        Specified by:
        getQuickInfo in interface adams.core.QuickInfoSupporter
        Overrides:
        getQuickInfo in class adams.flow.core.AbstractActor
        Returns:
        null if no info available, otherwise short string

      • accepts

        public Class[] accepts()
        Returns the class that the consumer accepts.
        Returns:
        weka.core.Instances.class

      • generates

        public Class[] generates()
        Returns the class of objects that it generates.
        Returns:
        adams.data.spreadsheet.SpreadSheet.class

      • doExecute

        protected String doExecute()
        Executes the flow item.
        Specified by:
        doExecute in class adams.flow.core.AbstractActor
        Returns:
        null if everything is fine, otherwise error message