Package adams.data.io.input

Class SimpleSpectrumReader

java.lang.Object

adams.core.logging.LoggingObject

adams.core.logging.CustomLoggingLevelObject

adams.core.option.AbstractOptionHandler

adams.data.io.input.AbstractDataContainerReader<Spectrum>

adams.data.io.input.AbstractSpectrumReader

adams.data.io.input.SimpleSpectrumReader

All Implemented Interfaces:

adams.core.AdditionalInformationHandler, adams.core.CleanUpHandler, adams.core.Destroyable, adams.core.GlobalInfoSupporter, adams.core.io.FileFormatHandler, adams.core.logging.LoggingLevelHandler, adams.core.logging.LoggingSupporter, adams.core.option.OptionHandler, adams.core.ShallowCopySupporter<adams.data.io.input.AbstractDataContainerReader>, adams.core.SizeOfHandler, adams.core.Stoppable, Serializable, Comparable

public class SimpleSpectrumReader
extends AbstractSpectrumReader

Reads spectrums in the internal CSV format.

Valid options are:

-D (property: debug)
         If set to true, scheme may output additional info to the console.
 

-input <java.io.File> (property: input)
         The file to read and turn into a spectrum.
         default: .
 

Author:

fracpete (fracpete at waikato dot ac dot nz)

See Also:

Serialized Form

Field Summary

Fields inherited from class adams.data.io.input.AbstractSpectrumReader

m_Format, m_Instrument, m_KeepFormat, m_Stopped, m_UseAbsoluteSource, OPTION_OUTPUTDIR

Fields inherited from class adams.data.io.input.AbstractDataContainerReader

m_CreateDummyReport, m_Input, m_InputIsFile, m_Processed, m_ReadData

Fields inherited from class adams.core.option.AbstractOptionHandler

m_OptionManager

Fields inherited from class adams.core.logging.LoggingObject

m_Logger, m_LoggingIsEnabled, m_LoggingLevel

Constructor Summary

Constructors

Constructor	Description
SimpleSpectrumReader()

Method Summary

Modifier and Type	Method	Description
String	getFormatDescription()	Returns a string describing the format (used in the file chooser).
String[]	getFormatExtensions()	Returns the extension(s) of the format.
String	globalInfo()	Returns a string describing the object.
static void	main(String[] args)	Runs the reader from the command-line.
protected boolean	read(BufferedReader reader)	Reads its content from the given reader.
protected boolean	read(String filename)	Reads its content from the given file.
protected void	readData()	Performs the actual reading.

Methods inherited from class adams.data.io.input.AbstractSpectrumReader

checkData, createDummyReport, defineOptions, formatTipText, getDefaultFormat, getDefaultInstrument, getDefaultKeepFormat, getDefaultUseAbsoluteSource, getFormat, getInstrument, getKeepFormat, getReaders, getUseAbsoluteSource, instrumentTipText, keepFormatTipText, postProcessData, runReader, setFormat, setInstrument, setKeepFormat, setUseAbsoluteSource, stopExecution, useAbsoluteSourceTipText

Methods inherited from class adams.data.io.input.AbstractDataContainerReader

cleanUp, compareTo, createDummyReportTipText, destroy, doRead, equals, getAdditionalInformation, getCreateDummyReport, getDefaultFormatExtension, getInput, initialize, inputTipText, isInputFile, read, reset, setCreateDummyReport, setInput, shallowCopy, shallowCopy

Methods inherited from class adams.core.option.AbstractOptionHandler

cleanUpOptions, finishInit, getDefaultLoggingLevel, getOptionManager, loggingLevelTipText, newOptionManager, setLoggingLevel, toCommandLine, toString

Methods inherited from class adams.core.logging.LoggingObject

configureLogger, getLogger, getLoggingLevel, initializeLogging, isLoggingEnabled, sizeOf

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface adams.core.logging.LoggingLevelHandler

getLoggingLevel

Constructor Detail

SimpleSpectrumReader

public SimpleSpectrumReader()

Method Detail

globalInfo

public String globalInfo()

Returns a string describing the object.

Specified by:

globalInfo in interface adams.core.GlobalInfoSupporter

Specified by:

globalInfo in class adams.core.option.AbstractOptionHandler

Returns:

a description suitable for displaying in the gui

getFormatDescription

public String getFormatDescription()

Returns a string describing the format (used in the file chooser).

Specified by:

getFormatDescription in interface adams.core.io.FileFormatHandler

Specified by:

getFormatDescription in class adams.data.io.input.AbstractDataContainerReader<Spectrum>

Returns:

a description suitable for displaying in the file chooser

getFormatExtensions

public String[] getFormatExtensions()

Returns the extension(s) of the format.

Specified by:

getFormatExtensions in interface adams.core.io.FileFormatHandler

Specified by:

getFormatExtensions in class adams.data.io.input.AbstractDataContainerReader<Spectrum>

Returns:

the extension(s) (without the dot!)

read

protected boolean read(BufferedReader reader)

Reads its content from the given reader.

Parameters:

reader - the reader to use

Returns:

true if successfully read

read

protected boolean read(String filename)

Reads its content from the given file.

Parameters:

filename - the file to read from

Returns:

true if successfully read

readData

protected void readData()

Performs the actual reading.

Specified by:

readData in class adams.data.io.input.AbstractDataContainerReader<Spectrum>

main

public static void main(String[] args)

Runs the reader from the command-line. If the option AbstractSpectrumReader.OPTION_OUTPUTDIR is specified then the read spectra get output as .spec files in that directory.

Parameters:

args - the command-line options to use