Package adams.data.filter

Class Summary

Centroid	Computes the centroid of a heatmap and adds this to the heatmap's report. It is possible to perform multiple iterations and each time with a shrunken heatmap.
CropToCentroid	Generates a cropped heatmap centered around the centroid calculated on the pre-filtered data.
FeatureGenerator	A filter that modifies the quantitation reports of chromatograms being passed through.
Normalize	Normalizes the values of a heatmap to have a range of 0 to 1.
NormalizeToField	Divides all the heatmap values by the value of the specified numeric field. If the report field is not available or not numeric, then an error gets attached to the notes.
Rotate	Rotates a heatmap by a specified number of degrees clockwise.
Standardize	Standardizes the values of a heatmap to have mean of 1 and stdev 1. NB: normally, the mean is 0 when standardizing, but heatmaps only allow positive values.
Submap	Creates a submap, specified by the coordinates of the top-left corner (row and column), width and height.
SubtractField	Subtracts the value of the numeric field from all non-zero heatmap values. Values that fall below zero are automatically set to zero (minimum value for a heatmap).
Threshold	Zeroes all intensity values that are either below or above a user-specified threshold, depending on the selected threshold type.

Enum Summary

Rotate.Rotation	Defines the type of rotation to perform.
Threshold.Type	The type of threshold.