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Uses of Class
adams.data.heatmap.Heatmap

Packages that use Heatmap
adams.data.featuregenerator   
adams.data.filter   
adams.data.heatmap   
adams.data.instances   
adams.data.io.output   
adams.gui.chooser   
adams.gui.visualization.heatmap   
 

Uses of Heatmap in adams.data.featuregenerator
 

Methods in adams.data.featuregenerator that return Heatmap
 Heatmap AbstractFeatureGenerator.generate(Heatmap data)
          Generates the features and adds them to the report.
protected  Heatmap Mean.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap Median.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap Min.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap MultiGenerator.processData(Heatmap data)
          Performs the actual feature generation.
protected abstract  Heatmap AbstractFeatureGenerator.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap FilteredFeatureGenerator.processData(Heatmap data)
          Processes the data/report.
protected  Heatmap PassThrough.processData(Heatmap data)
          Does nothing with the report.
protected  Heatmap Max.processData(Heatmap data)
          Performs the actual feature generation.
 

Methods in adams.data.featuregenerator with parameters of type Heatmap
protected  Double AbstractFeatureGenerator.addFeature(Heatmap data, double value)
          Adds the specified feature.
protected  Double AbstractFeatureGenerator.addFeature(Heatmap data, String suffix, double value)
          Adds the specified feature.
protected  void AbstractFeatureGenerator.checkData(Heatmap data)
          The default implementation only checks whether there is any data set.
 Heatmap AbstractFeatureGenerator.generate(Heatmap data)
          Generates the features and adds them to the report.
protected  Heatmap Mean.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap Median.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap Min.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap MultiGenerator.processData(Heatmap data)
          Performs the actual feature generation.
protected abstract  Heatmap AbstractFeatureGenerator.processData(Heatmap data)
          Performs the actual feature generation.
protected  Heatmap FilteredFeatureGenerator.processData(Heatmap data)
          Processes the data/report.
protected  Heatmap PassThrough.processData(Heatmap data)
          Does nothing with the report.
protected  Heatmap Max.processData(Heatmap data)
          Performs the actual feature generation.
 

Uses of Heatmap in adams.data.filter
 

Methods in adams.data.filter that return Heatmap
static Heatmap CropToCentroid.crop(Heatmap original, int centroidY, int centroidX, int height, int width)
          Crops the heatmap around the centroid stored in the heatmap's report.
protected  Heatmap Centroid.findCentroid(Heatmap data)
          Finds the centroid.
protected  Heatmap Rotate.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Normalize.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Submap.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap FeatureGenerator.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Centroid.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Threshold.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Standardize.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap NormalizeToField.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap SubtractField.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap CropToCentroid.processData(Heatmap filtered, Heatmap original)
          Performs the actual filtering, using the pre-filtered data to manipulate the original data.
 

Methods in adams.data.filter with parameters of type Heatmap
static Heatmap CropToCentroid.crop(Heatmap original, int centroidY, int centroidX, int height, int width)
          Crops the heatmap around the centroid stored in the heatmap's report.
protected  Heatmap Centroid.findCentroid(Heatmap data)
          Finds the centroid.
protected  Heatmap Rotate.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Normalize.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Submap.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap FeatureGenerator.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Centroid.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Threshold.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap Standardize.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap NormalizeToField.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap SubtractField.processData(Heatmap data)
          Performs the actual filtering.
protected  Heatmap CropToCentroid.processData(Heatmap filtered, Heatmap original)
          Performs the actual filtering, using the pre-filtered data to manipulate the original data.
 

Uses of Heatmap in adams.data.heatmap
 

Fields in adams.data.heatmap declared as Heatmap
protected  Heatmap HeatmapStatistic.m_Heatmap
          the heatmap to create the statistics for.
protected  Heatmap HeatmapValue.m_Parent
          the parent.
 

Methods in adams.data.heatmap that return Heatmap
static Heatmap Heatmap.fromIntensityString(int rows, int cols, String intensity)
          Creates a heatmap from the intensity string using the specified dimensions.
 Heatmap Heatmap.getClone()
          Returns a clone of the object.
 Heatmap Heatmap.getHeader()
          Returns an empty container with the same meta-data as this one.
 Heatmap Heatmap.getHeader(int height, int width)
          Returns an empty container with the same meta-data as this one, but with different dimensions of the map.
 Heatmap HeatmapStatistic.getHeatmap()
          Returns the underlying heatmap.
 Heatmap HeatmapValue.getParent()
          Returns the heatmap this point belongs to.
 Heatmap Heatmap.submap(int row, int col, int height, int width)
          Returns the specified submap.
 

Methods in adams.data.heatmap with parameters of type Heatmap
 void HeatmapStatistic.setHeatmap(Heatmap value)
          Sets the heatmap to generate the statistics for.
 

Constructors in adams.data.heatmap with parameters of type Heatmap
HeatmapStatistic(Heatmap map)
          Initializes the statistics with the specified heatmap.
 

Uses of Heatmap in adams.data.instances
 

Methods in adams.data.instances with parameters of type Heatmap
protected  void AbstractFieldInstanceGenerator.addFields(Heatmap data, double[] values)
          Adds the fields of the heatmap to the data array.
protected  void RawInstanceGenerator.checkHeader(Heatmap data)
          Checks whether the number of waves are the same.
protected  void AbstractFieldInstanceGenerator.checkHeader(Heatmap data)
          Checks whether the number of waves are the same.
protected  void IntensityInstanceGenerator.checkHeader(Heatmap data)
          Checks whether the number of waves are the same.
protected  void HistogramInstanceGenerator.checkHeader(Heatmap data)
          Checks whether the number of waves are the same.
protected  void RawInstanceGenerator.generateHeader(Heatmap data)
          Generates the header of the output data.
protected  void FieldInstanceGenerator.generateHeader(Heatmap data)
          Generates the header of the output data.
protected  void IntensityInstanceGenerator.generateHeader(Heatmap data)
          Generates the header of the output data.
protected  void HistogramInstanceGenerator.generateHeader(Heatmap data)
          Generates the header of the output data.
protected  Instance RawInstanceGenerator.generateOutput(Heatmap data)
          Generates the actual data.
protected  Instance FieldInstanceGenerator.generateOutput(Heatmap data)
          Generates the actual data.
protected  Instance IntensityInstanceGenerator.generateOutput(Heatmap data)
          Generates the actual data.
protected  Instance HistogramInstanceGenerator.generateOutput(Heatmap data)
          Generates the actual data.
 

Uses of Heatmap in adams.data.io.output
 

Method parameters in adams.data.io.output with type arguments of type Heatmap
protected  boolean FloatMatrixHeatmapWriter.writeData(List<Heatmap> data)
          Performs the actual writing.
protected  boolean SpreadSheetHeatmapWriter.writeData(List<Heatmap> data)
          Performs the actual writing.
 

Uses of Heatmap in adams.gui.chooser
 

Methods in adams.gui.chooser that return types with arguments of type Heatmap
protected  AbstractDataContainerReader<Heatmap> HeatmapFileChooser.getDefaultReader()
          Returns the default reader.
protected  AbstractDataContainerWriter<Heatmap> HeatmapFileChooser.getDefaultWriter()
          Returns the default writer.
 AbstractDataContainerReader<Heatmap> HeatmapFileChooser.getReaderForFile(File file)
          Returns the reader for the specified file.
 AbstractDataContainerWriter<Heatmap> HeatmapFileChooser.getWriterForFile(File file)
          Returns the writer for the specified file.
 

Uses of Heatmap in adams.gui.visualization.heatmap
 

Fields in adams.gui.visualization.heatmap declared as Heatmap
protected  Heatmap HeatmapPanel.m_Heatmap
          the heatmap on display.
 

Fields in adams.gui.visualization.heatmap with type parameters of type Heatmap
protected  AbstractFilter<Heatmap> HeatmapViewerPanel.m_CurrentFilter
          the current filter.
 

Methods in adams.gui.visualization.heatmap that return Heatmap
 Heatmap HeatmapPanel.getHeatmap()
          The current heatmap on display.
 

Methods in adams.gui.visualization.heatmap with parameters of type Heatmap
protected  HeatmapPanel HeatmapViewerPanel.newPanel(Heatmap map)
          Creates a new panel and configures it.
 void HeatmapPanel.setHeatmap(Heatmap value)
          Sets the heatmap to display.
 

Method parameters in adams.gui.visualization.heatmap with type arguments of type Heatmap
 void HeatmapViewerPanel.filter(FilterEvent<Heatmap> e)
          Filters the data.
 

Constructors in adams.gui.visualization.heatmap with parameters of type Heatmap
HeatmapContainer(HeatmapContainerManager manager, Heatmap payload)
          Initializes the container.
 

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