adams.flow.transformer
Class HeatmapFilter

java.lang.Object
  extended by adams.core.ConsoleObject
      extended by adams.core.option.AbstractOptionHandler
          extended by adams.flow.core.AbstractActor
              extended by adams.flow.transformer.AbstractTransformer
                  extended by adams.flow.transformer.AbstractDataContainerTransformer
                      extended by adams.flow.transformer.AbstractFilter
                          extended by adams.flow.transformer.HeatmapFilter
All Implemented Interfaces:
AdditionalInformationHandler, CleanUpHandler, Debuggable, DebugOutputHandler, Destroyable, OptionHandler, QuickInfoSupporter, ShallowCopySupporter<AbstractActor>, SizeOfHandler, Stoppable, VariableChangeListener, Actor, ErrorHandler, InputConsumer, OutputProducer, ProvenanceSupporter, Serializable, Comparable

public class HeatmapFilter
extends AbstractFilter

Filters data using the specified filter.

Input/output:
- accepts:
   adams.data.container.DataContainer
   adams.data.heatmap.Heatmap
- generates:
   adams.data.container.DataContainer
   adams.data.heatmap.Heatmap

Valid options are:

-D <int> (property: debugLevel)
    The greater the number the more additional info the scheme may output to
    the console (0 = off).
    default: 0
    minimum: 0
 
-name <java.lang.String> (property: name)
    The name of the actor.
    default: HeatmapFilter
 
-annotation <adams.core.base.BaseText> (property: annotations)
    The annotations to attach to this actor.
    default:
 
-skip (property: skip)
    If set to true, transformation is skipped and the input token is just forwarded
    as it is.
 
-stop-flow-on-error (property: stopFlowOnError)
    If set to true, the flow gets stopped in case this actor encounters an error;
     useful for critical actors.
 
-filter <adams.data.filter.AbstractFilter> (property: filter)
    The filter to use for filtering the data.
    default: adams.data.filter.PassThrough
 

Version:
$Revision: 6027 $
Author:
fracpete (fracpete at waikato dot ac dot nz)
See Also:
Serialized Form

Field Summary
 
Fields inherited from class adams.flow.transformer.AbstractFilter
m_Filter
 
Fields inherited from class adams.flow.transformer.AbstractTransformer
BACKUP_INPUT, BACKUP_OUTPUT, m_InputToken, m_OutputToken
 
Fields inherited from class adams.flow.core.AbstractActor
m_Annotations, m_BackupState, m_DetectedObjectVariables, m_DetectedVariables, m_ErrorHandler, m_Executed, m_Executing, m_ExecutionListeningSupporter, m_FullName, m_Headless, m_Name, m_Parent, m_Root, m_ScopeHandler, m_Self, m_Skip, m_StopFlowOnError, m_StopMessage, m_Stopped, m_StorageHandler, m_VariablesUpdated
 
Fields inherited from class adams.core.option.AbstractOptionHandler
m_DebugLevel, m_OptionManager
 
Fields inherited from interface adams.flow.core.Actor
FILE_EXTENSION, FILE_EXTENSION_GZ
 
Constructor Summary
HeatmapFilter()
           
 
Method Summary
protected  AbstractDatabaseConnection getDatabaseConnection()
          Determines the database connection in the flow.
protected  Class getDataContainerClass()
          Returns the data container class in use.
 
Methods inherited from class adams.flow.transformer.AbstractFilter
defineOptions, doExecute, filterTipText, getFilter, getQuickInfo, globalInfo, setFilter, setUp, updateProvenance
 
Methods inherited from class adams.flow.transformer.AbstractDataContainerTransformer
accepts, generates
 
Methods inherited from class adams.flow.transformer.AbstractTransformer
backupState, execute, hasPendingOutput, input, output, postExecute, reset, restoreState, wrapUp
 
Methods inherited from class adams.flow.core.AbstractActor
annotationsTipText, canInspectOptions, canPerformSetUpCheck, cleanUp, compareTo, debug, destroy, equals, findVariables, findVariables, findVariables, forceVariables, forCommandLine, forName, getAdditionalInformation, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowActors, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, handleException, hasErrorHandler, hasStopMessage, index, initialize, isBackedUp, isExecuted, isExecuting, isFinished, isHeadless, isStopped, nameTipText, performSetUpChecks, preExecute, pruneBackup, pruneBackup, setAnnotations, setErrorHandler, setHeadless, setName, setParent, setSkip, setStopFlowOnError, setVariables, shallowCopy, shallowCopy, sizeOf, skipTipText, stopExecution, stopExecution, stopFlowOnErrorTipText, updateDetectedVariables, updatePrefix, updateVariables, variableChanged
 
Methods inherited from class adams.core.option.AbstractOptionHandler
cleanUpOptions, debug, debugLevelTipText, finishInit, getDebugLevel, getOptionManager, isDebugOn, newOptionManager, setDebugLevel, toCommandLine, toString
 
Methods inherited from class adams.core.ConsoleObject
getDebugging, getSystemErr, getSystemOut
 
Methods inherited from class java.lang.Object
clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface adams.flow.core.Actor
cleanUp, compareTo, debug, destroy, equals, findVariables, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowExecutionListeningSupporter, getFullName, getName, getNextSibling, getParent, getParentComponent, getPreviousSibling, getRoot, getScopeHandler, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, hasErrorHandler, hasStopMessage, index, isExecuted, isFinished, isHeadless, isStopped, setAnnotations, setErrorHandler, setHeadless, setName, setParent, setSkip, setStopFlowOnError, setVariables, sizeOf, stopExecution, stopExecution, variableChanged
 
Methods inherited from interface adams.core.AdditionalInformationHandler
getAdditionalInformation
 
Methods inherited from interface adams.core.option.OptionHandler
cleanUpOptions, getOptionManager
 

Constructor Detail

HeatmapFilter

public HeatmapFilter()
Method Detail

getDataContainerClass

protected Class getDataContainerClass()
Returns the data container class in use.

Specified by:
getDataContainerClass in class AbstractFilter
Returns:
the container class

getDatabaseConnection

protected AbstractDatabaseConnection getDatabaseConnection()
Determines the database connection in the flow.

Specified by:
getDatabaseConnection in class AbstractFilter
Returns:
the database connection to use


Copyright © 2013 University of Waikato, Hamilton, NZ. All Rights Reserved.