adams.flow.standalone
Class RSetup

java.lang.Object
  adams.core.ConsoleObject
      adams.core.option.AbstractOptionHandler
          adams.flow.core.AbstractActor
              adams.flow.standalone.AbstractStandalone
                  adams.flow.standalone.RSetup

All Implemented Interfaces:

AdditionalInformationHandler, CleanUpHandler, Debuggable, DebugOutputHandler, Destroyable, OptionHandler, QuickInfoSupporter, ShallowCopySupporter<AbstractActor>, SizeOfHandler, Stoppable, VariableChangeListener, Actor, ErrorHandler, Serializable, Comparable

public class RSetup
extends AbstractStandalone

Sets up some variables for R.

Version:

$Revision$

Author:

rsmith

See Also:

Serialized Form

Field Summary

protected String

m_RHOME

Fields inherited from class adams.flow.core.AbstractActor

m_Annotations, m_BackupState, m_DetectedObjectVariables, m_DetectedVariables, m_ErrorHandler, m_Executed, m_Executing, m_FullName, m_Headless, m_Name, m_Parent, m_Root, m_Self, m_Skip, m_StopFlowOnError, m_StopMessage, m_Stopped, m_StorageHandler, m_VariablesUpdated

Fields inherited from class adams.core.option.AbstractOptionHandler

m_DebugLevel, m_OptionManager

Fields inherited from interface adams.flow.core.Actor

FILE_EXTENSION, FILE_EXTENSION_GZ

Constructor Summary

RSetup()

Method Summary

void	defineOptions() Adds options to the internal list of options.
protected String	doExecute() Does nothing here.
String	getRHOME() Returns the script.
String	globalInfo() Description of the actor.
String	RHOMETipText() Description of the script.
void	setRHOME(String R_HOME) Sets the script to be fed into R.

Methods inherited from class adams.flow.core.AbstractActor

annotationsTipText, backupState, canInspectOptions, canPerformSetUpCheck, cleanUp, compareTo, debug, destroy, equals, execute, findVariables, findVariables, findVariables, forceVariables, forCommandLine, forName, getAdditionalInformation, getAnnotations, getDefaultName, getDetectedVariables, getErrorHandler, getFlowActors, getFullName, getName, getNextSibling, getParent, getPreviousSibling, getQuickInfo, getRoot, getSkip, getStopFlowOnError, getStopMessage, getStorageHandler, getVariables, handleError, handleException, hasErrorHandler, hasStopMessage, index, initialize, isBackedUp, isExecuted, isExecuting, isFinished, isHeadless, isStopped, nameTipText, performSetUpChecks, postExecute, preExecute, pruneBackup, pruneBackup, reset, restoreState, setAnnotations, setErrorHandler, setHeadless, setName, setParent, setSkip, setStopFlowOnError, setUp, setVariables, shallowCopy, shallowCopy, sizeOf, skipTipText, stopExecution, stopExecution, stopFlowOnErrorTipText, updateDetectedVariables, updatePrefix, updateVariables, variableChanged, wrapUp

Methods inherited from class adams.core.option.AbstractOptionHandler

cleanUpOptions, debug, debugLevelTipText, finishInit, getDebugLevel, getOptionManager, isDebugOn, newOptionManager, setDebugLevel, toCommandLine, toString

Methods inherited from class adams.core.ConsoleObject

getDebugging, getSystemErr, getSystemOut

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface adams.core.option.OptionHandler

cleanUpOptions, getOptionManager

Field Detail

m_RHOME

protected String m_RHOME

Constructor Detail

RSetup

public RSetup()

Method Detail

defineOptions

public void defineOptions()

Adds options to the internal list of options.

Specified by:

defineOptions in interface OptionHandler

Overrides:

defineOptions in class AbstractActor

getRHOME

public String getRHOME()

Returns the script.

Returns:

the script

setRHOME

public void setRHOME(String R_HOME)

Sets the script to be fed into R.

Parameters:

script - the script to be fed to R

RHOMETipText

public String RHOMETipText()

Description of the script.

Returns:

string version of the description

doExecute

protected String doExecute()

Does nothing here.

Specified by:

doExecute in class AbstractActor

globalInfo

public String globalInfo()

Description of the actor.

Specified by:

globalInfo in class AbstractOptionHandler