Uses of Interface
weka.core.CapabilitiesHandler

Packages that use CapabilitiesHandler
weka.associations   
weka.attributeSelection   
weka.classifiers   
weka.classifiers.bayes   
weka.classifiers.bayes.net   
weka.classifiers.bayes.net.estimate   
weka.classifiers.functions   
weka.classifiers.functions.supportVector   
weka.classifiers.lazy   
weka.classifiers.meta   
weka.classifiers.meta.nestedDichotomies   
weka.classifiers.mi   
weka.classifiers.mi.supportVector   
weka.classifiers.misc   
weka.classifiers.pmml.consumer   
weka.classifiers.rules   
weka.classifiers.rules.part   
weka.classifiers.trees   
weka.classifiers.trees.ft   
weka.classifiers.trees.j48   
weka.classifiers.trees.lmt   
weka.classifiers.trees.m5   
weka.clusterers   
weka.core   
weka.core.converters   
weka.estimators   
weka.filters   
weka.filters.supervised.attribute   
weka.filters.supervised.instance   
weka.filters.unsupervised.attribute   
weka.filters.unsupervised.instance   
 

Uses of CapabilitiesHandler in weka.associations
 

Classes in weka.associations that implement CapabilitiesHandler
 class AbstractAssociator
          Abstract scheme for learning associations.
 class Apriori
          Class implementing an Apriori-type algorithm.
 class FilteredAssociator
          Class for running an arbitrary associator on data that has been passed through an arbitrary filter.
 class FPGrowth
          Class implementing the FP-growth algorithm for finding large item sets without candidate generation.
 class GeneralizedSequentialPatterns
          Class implementing a GSP algorithm for discovering sequential patterns in a sequential data set.
The attribute identifying the distinct data sequences contained in the set can be determined by the respective option.
 class PredictiveApriori
          Class implementing the predictive apriori algorithm to mine association rules.
It searches with an increasing support threshold for the best 'n' rules concerning a support-based corrected confidence value.

For more information see:

Tobias Scheffer: Finding Association Rules That Trade Support Optimally against Confidence.
 class SingleAssociatorEnhancer
          Abstract utility class for handling settings common to meta associators that use a single base associator.
 class Tertius
          Finds rules according to confirmation measure (Tertius-type algorithm).

For more information see:

P.
 

Uses of CapabilitiesHandler in weka.attributeSelection
 

Classes in weka.attributeSelection that implement CapabilitiesHandler
 class ASEvaluation
          Abstract attribute selection evaluation class
 class AttributeSetEvaluator
          Abstract attribute set evaluator.
 class CfsSubsetEval
          CfsSubsetEval :

Evaluates the worth of a subset of attributes by considering the individual predictive ability of each feature along with the degree of redundancy between them.

Subsets of features that are highly correlated with the class while having low intercorrelation are preferred.

For more information see:

M.
 class ChiSquaredAttributeEval
          ChiSquaredAttributeEval :

Evaluates the worth of an attribute by computing the value of the chi-squared statistic with respect to the class.

Valid options are:

 class ClassifierSubsetEval
          Classifier subset evaluator:

Evaluates attribute subsets on training data or a seperate hold out testing set.
 class ConsistencySubsetEval
          ConsistencySubsetEval :

Evaluates the worth of a subset of attributes by the level of consistency in the class values when the training instances are projected onto the subset of attributes.
 class CostSensitiveASEvaluation
          Abstract base class for cost-sensitive subset and attribute evaluators.
 class CostSensitiveAttributeEval
          A meta subset evaluator that makes its base subset evaluator cost-sensitive.
 class CostSensitiveSubsetEval
          A meta subset evaluator that makes its base subset evaluator cost-sensitive.
 class FilteredAttributeEval
          Class for running an arbitrary attribute evaluator on data that has been passed through an arbitrary filter (note: filters that alter the order or number of attributes are not allowed).
 class FilteredSubsetEval
          Class for running an arbitrary subset evaluator on data that has been passed through an arbitrary filter (note: filters that alter the order or number of attributes are not allowed).
 class GainRatioAttributeEval
          GainRatioAttributeEval :

Evaluates the worth of an attribute by measuring the gain ratio with respect to the class.

GainR(Class, Attribute) = (H(Class) - H(Class | Attribute)) / H(Attribute).

Valid options are:

 class HoldOutSubsetEvaluator
          Abstract attribute subset evaluator capable of evaluating subsets with respect to a data set that is distinct from that used to initialize/ train the subset evaluator.
 class InfoGainAttributeEval
          InfoGainAttributeEval :

Evaluates the worth of an attribute by measuring the information gain with respect to the class.

InfoGain(Class,Attribute) = H(Class) - H(Class | Attribute).

Valid options are:

 class LatentSemanticAnalysis
          Performs latent semantic analysis and transformation of the data.
 class OneRAttributeEval
          OneRAttributeEval :

Evaluates the worth of an attribute by using the OneR classifier.

Valid options are:

 class ReliefFAttributeEval
          ReliefFAttributeEval :

Evaluates the worth of an attribute by repeatedly sampling an instance and considering the value of the given attribute for the nearest instance of the same and different class.
 class SVMAttributeEval
          SVMAttributeEval :

Evaluates the worth of an attribute by using an SVM classifier.
 class SymmetricalUncertAttributeEval
          SymmetricalUncertAttributeEval :

Evaluates the worth of an attribute by measuring the symmetrical uncertainty with respect to the class.
 class UnsupervisedAttributeEvaluator
          Abstract unsupervised attribute evaluator.
 class UnsupervisedSubsetEvaluator
          Abstract unsupervised attribute subset evaluator.
 class WrapperSubsetEval
          WrapperSubsetEval:

Evaluates attribute sets by using a learning scheme.
 

Uses of CapabilitiesHandler in weka.classifiers
 

Classes in weka.classifiers that implement CapabilitiesHandler
 class Classifier
          Abstract classifier.
 class IteratedSingleClassifierEnhancer
          Abstract utility class for handling settings common to meta classifiers that build an ensemble from a single base learner.
 class MultipleClassifiersCombiner
          Abstract utility class for handling settings common to meta classifiers that build an ensemble from multiple classifiers.
 class RandomizableClassifier
          Abstract utility class for handling settings common to randomizable classifiers.
 class RandomizableIteratedSingleClassifierEnhancer
          Abstract utility class for handling settings common to randomizable meta classifiers that build an ensemble from a single base learner.
 class RandomizableMultipleClassifiersCombiner
          Abstract utility class for handling settings common to randomizable meta classifiers that build an ensemble from multiple classifiers based on a given random number seed.
 class RandomizableSingleClassifierEnhancer
          Abstract utility class for handling settings common to randomizable meta classifiers that build an ensemble from a single base learner.
 class SingleClassifierEnhancer
          Abstract utility class for handling settings common to meta classifiers that use a single base learner.
 

Uses of CapabilitiesHandler in weka.classifiers.bayes
 

Classes in weka.classifiers.bayes that implement CapabilitiesHandler
 class AODE
          AODE achieves highly accurate classification by averaging over all of a small space of alternative naive-Bayes-like models that have weaker (and hence less detrimental) independence assumptions than naive Bayes.
 class AODEsr
          AODEsr augments AODE with Subsumption Resolution.AODEsr detects specializations between two attribute values at classification time and deletes the generalization attribute value.
For more information, see:
Fei Zheng, Geoffrey I.
 class BayesianLogisticRegression
          Implements Bayesian Logistic Regression for both Gaussian and Laplace Priors.

For more information, see

Alexander Genkin, David D.
 class BayesNet
          Bayes Network learning using various search algorithms and quality measures.
Base class for a Bayes Network classifier.
 class ComplementNaiveBayes
          Class for building and using a Complement class Naive Bayes classifier.

For more information see,

Jason D.
 class DMNBtext
          Class for building and using a Discriminative Multinomial Naive Bayes classifier.
 class HNB
          Contructs Hidden Naive Bayes classification model with high classification accuracy and AUC.

For more information refer to:

H.
 class NaiveBayes
          Class for a Naive Bayes classifier using estimator classes.
 class NaiveBayesMultinomial
          Class for building and using a multinomial Naive Bayes classifier.
 class NaiveBayesMultinomialUpdateable
          Class for building and using a multinomial Naive Bayes classifier.
 class NaiveBayesSimple
          Class for building and using a simple Naive Bayes classifier.Numeric attributes are modelled by a normal distribution.

For more information, see

Richard Duda, Peter Hart (1973).
 class NaiveBayesUpdateable
          Class for a Naive Bayes classifier using estimator classes.
 class WAODE
          WAODE contructs the model called Weightily Averaged One-Dependence Estimators.

For more information, see

L.
 

Uses of CapabilitiesHandler in weka.classifiers.bayes.net
 

Classes in weka.classifiers.bayes.net that implement CapabilitiesHandler
 class BayesNetGenerator
          Bayes Network learning using various search algorithms and quality measures.
Base class for a Bayes Network classifier.
 class BIFReader
          Builds a description of a Bayes Net classifier stored in XML BIF 0.3 format.

For more details on XML BIF see:

Fabio Cozman, Marek Druzdzel, Daniel Garcia (1998).
 class EditableBayesNet
          Bayes Network learning using various search algorithms and quality measures.
Base class for a Bayes Network classifier.
 

Uses of CapabilitiesHandler in weka.classifiers.bayes.net.estimate
 

Classes in weka.classifiers.bayes.net.estimate that implement CapabilitiesHandler
 class DiscreteEstimatorBayes
          Symbolic probability estimator based on symbol counts and a prior.
 class DiscreteEstimatorFullBayes
          Symbolic probability estimator based on symbol counts and a prior.
 

Uses of CapabilitiesHandler in weka.classifiers.functions
 

Classes in weka.classifiers.functions that implement CapabilitiesHandler
 class GaussianProcesses
          Implements Gaussian Processes for regression without hyperparameter-tuning.
 class IsotonicRegression
          Learns an isotonic regression model.
 class LeastMedSq
          Implements a least median sqaured linear regression utilising the existing weka LinearRegression class to form predictions.
 class LibLINEAR
          A wrapper class for the liblinear tools (the liblinear classes, typically the jar file, need to be in the classpath to use this classifier).
Rong-En Fan, Kai-Wei Chang, Cho-Jui Hsieh, Xiang-Rui Wang, Chih-Jen Lin (2008).
 class LibSVM
          A wrapper class for the libsvm tools (the libsvm classes, typically the jar file, need to be in the classpath to use this classifier).
LibSVM runs faster than SMO since it uses LibSVM to build the SVM classifier.
LibSVM allows users to experiment with One-class SVM, Regressing SVM, and nu-SVM supported by LibSVM tool.
 class LinearRegression
          Class for using linear regression for prediction.
 class Logistic
          Class for building and using a multinomial logistic regression model with a ridge estimator.

There are some modifications, however, compared to the paper of leCessie and van Houwelingen(1992):

If there are k classes for n instances with m attributes, the parameter matrix B to be calculated will be an m*(k-1) matrix.

The probability for class j with the exception of the last class is

Pj(Xi) = exp(XiBj)/((sum[j=1..(k-1)]exp(Xi*Bj))+1)

The last class has probability

1-(sum[j=1..(k-1)]Pj(Xi))
= 1/((sum[j=1..(k-1)]exp(Xi*Bj))+1)

The (negative) multinomial log-likelihood is thus:

L = -sum[i=1..n]{
sum[j=1..(k-1)](Yij * ln(Pj(Xi)))
+(1 - (sum[j=1..(k-1)]Yij))
* ln(1 - sum[j=1..(k-1)]Pj(Xi))
} + ridge * (B^2)

In order to find the matrix B for which L is minimised, a Quasi-Newton Method is used to search for the optimized values of the m*(k-1) variables.
 class MultilayerPerceptron
          A Classifier that uses backpropagation to classify instances.
This network can be built by hand, created by an algorithm or both.
 class PaceRegression
          Class for building pace regression linear models and using them for prediction.
 class PLSClassifier
          A wrapper classifier for the PLSFilter, utilizing the PLSFilter's ability to perform predictions.
 class RBFNetwork
          Class that implements a normalized Gaussian radial basisbasis function network.
It uses the k-means clustering algorithm to provide the basis functions and learns either a logistic regression (discrete class problems) or linear regression (numeric class problems) on top of that.
 class SimpleLinearRegression
          Learns a simple linear regression model.
 class SimpleLogistic
          Classifier for building linear logistic regression models.
 class SMO
          Implements John Platt's sequential minimal optimization algorithm for training a support vector classifier.

This implementation globally replaces all missing values and transforms nominal attributes into binary ones.
 class SMOreg
          SMOreg implements the support vector machine for regression.
 class SPegasos
          Implements the stochastic variant of the Pegasos (Primal Estimated sub-GrAdient SOlver for SVM) method of Shalev-Shwartz et al.
 class VotedPerceptron
          Implementation of the voted perceptron algorithm by Freund and Schapire.
 class Winnow
          Implements Winnow and Balanced Winnow algorithms by Littlestone.

For more information, see

N.
 

Uses of CapabilitiesHandler in weka.classifiers.functions.supportVector
 

Classes in weka.classifiers.functions.supportVector that implement CapabilitiesHandler
 class CachedKernel
          Base class for RBFKernel and PolyKernel that implements a simple LRU.
 class Kernel
          Abstract kernel.
 class NormalizedPolyKernel
          The normalized polynomial kernel.
K(x,y) = <x,y>/sqrt(<x,x><y,y>) where <x,y> = PolyKernel(x,y)

Valid options are:

 class PolyKernel
          The polynomial kernel : K(x, y) = <x, y>^p or K(x, y) = (<x, y>+1)^p

Valid options are:

 class PrecomputedKernelMatrixKernel
          This kernel is based on a static kernel matrix that is read from a file.
 class Puk
          The Pearson VII function-based universal kernel.

For more information see:

B.
 class RBFKernel
          The RBF kernel.
 class StringKernel
          Implementation of the subsequence kernel (SSK) as described in [1] and of the subsequence kernel with lambda pruning (SSK-LP) as described in [2].

For more information, see

Huma Lodhi, Craig Saunders, John Shawe-Taylor, Nello Cristianini, Christopher J.
 

Uses of CapabilitiesHandler in weka.classifiers.lazy
 

Classes in weka.classifiers.lazy that implement CapabilitiesHandler
 class IB1
          Nearest-neighbour classifier.
 class IBk
          K-nearest neighbours classifier.
 class KStar
          K* is an instance-based classifier, that is the class of a test instance is based upon the class of those training instances similar to it, as determined by some similarity function.
 class LBR
          Lazy Bayesian Rules Classifier.
 class LWL
          Locally weighted learning.
 

Uses of CapabilitiesHandler in weka.classifiers.meta
 

Classes in weka.classifiers.meta that implement CapabilitiesHandler
 class AdaBoostM1
          Class for boosting a nominal class classifier using the Adaboost M1 method.
 class AdditiveRegression
          Meta classifier that enhances the performance of a regression base classifier.
 class AttributeSelectedClassifier
          Dimensionality of training and test data is reduced by attribute selection before being passed on to a classifier.
 class Bagging
          Class for bagging a classifier to reduce variance.
 class ClassificationViaClustering
          A simple meta-classifier that uses a clusterer for classification.
 class ClassificationViaRegression
          Class for doing classification using regression methods.
 class CostSensitiveClassifier
          A metaclassifier that makes its base classifier cost-sensitive.
 class CVParameterSelection
          Class for performing parameter selection by cross-validation for any classifier.

For more information, see:

R.
 class Dagging
          This meta classifier creates a number of disjoint, stratified folds out of the data and feeds each chunk of data to a copy of the supplied base classifier.
 class Decorate
          DECORATE is a meta-learner for building diverse ensembles of classifiers by using specially constructed artificial training examples.
 class END
          A meta classifier for handling multi-class datasets with 2-class classifiers by building an ensemble of nested dichotomies.

For more info, check

Lin Dong, Eibe Frank, Stefan Kramer: Ensembles of Balanced Nested Dichotomies for Multi-class Problems.
 class FilteredClassifier
          Class for running an arbitrary classifier on data that has been passed through an arbitrary filter.
 class Grading
          Implements Grading.
 class GridSearch
          Performs a grid search of parameter pairs for the a classifier (Y-axis, default is LinearRegression with the "Ridge" parameter) and the PLSFilter (X-axis, "# of Components") and chooses the best pair found for the actual predicting.

The initial grid is worked on with 2-fold CV to determine the values of the parameter pairs for the selected type of evaluation (e.g., accuracy).
 class LogitBoost
          Class for performing additive logistic regression.
 class MetaCost
          This metaclassifier makes its base classifier cost-sensitive using the method specified in

Pedro Domingos: MetaCost: A general method for making classifiers cost-sensitive.
 class MultiBoostAB
          Class for boosting a classifier using the MultiBoosting method.

MultiBoosting is an extension to the highly successful AdaBoost technique for forming decision committees.
 class MultiClassClassifier
          A metaclassifier for handling multi-class datasets with 2-class classifiers.
 class MultiScheme
          Class for selecting a classifier from among several using cross validation on the training data or the performance on the training data.
 class OrdinalClassClassifier
          Meta classifier that allows standard classification algorithms to be applied to ordinal class problems.

For more information see:

Eibe Frank, Mark Hall: A Simple Approach to Ordinal Classification.
 class RacedIncrementalLogitBoost
          Classifier for incremental learning of large datasets by way of racing logit-boosted committees.

For more information see:

Eibe Frank, Geoffrey Holmes, Richard Kirkby, Mark Hall: Racing committees for large datasets.
 class RandomCommittee
          Class for building an ensemble of randomizable base classifiers.
 class RandomSubSpace
          This method constructs a decision tree based classifier that maintains highest accuracy on training data and improves on generalization accuracy as it grows in complexity.
 class RegressionByDiscretization
          A regression scheme that employs any classifier on a copy of the data that has the class attribute (equal-width) discretized.
 class RotationForest
          Class for construction a Rotation Forest.
 class Stacking
          Combines several classifiers using the stacking method.
 class StackingC
          Implements StackingC (more efficient version of stacking).

For more information, see

A.K.
 class ThresholdSelector
          A metaclassifier that selecting a mid-point threshold on the probability output by a Classifier.
 class Vote
          Class for combining classifiers.
 

Uses of CapabilitiesHandler in weka.classifiers.meta.nestedDichotomies
 

Classes in weka.classifiers.meta.nestedDichotomies that implement CapabilitiesHandler
 class ClassBalancedND
          A meta classifier for handling multi-class datasets with 2-class classifiers by building a random class-balanced tree structure.

For more info, check

Lin Dong, Eibe Frank, Stefan Kramer: Ensembles of Balanced Nested Dichotomies for Multi-class Problems.
 class DataNearBalancedND
          A meta classifier for handling multi-class datasets with 2-class classifiers by building a random data-balanced tree structure.

For more info, check

Lin Dong, Eibe Frank, Stefan Kramer: Ensembles of Balanced Nested Dichotomies for Multi-class Problems.
 class ND
          A meta classifier for handling multi-class datasets with 2-class classifiers by building a random tree structure.

For more info, check

Lin Dong, Eibe Frank, Stefan Kramer: Ensembles of Balanced Nested Dichotomies for Multi-class Problems.
 

Uses of CapabilitiesHandler in weka.classifiers.mi
 

Classes in weka.classifiers.mi that implement CapabilitiesHandler
 class CitationKNN
          Modified version of the Citation kNN multi instance classifier.

For more information see:

Jun Wang, Zucker, Jean-Daniel: Solving Multiple-Instance Problem: A Lazy Learning Approach.
 class MDD
          Modified Diverse Density algorithm, with collective assumption.

More information about DD:

Oded Maron (1998).
 class MIBoost
          MI AdaBoost method, considers the geometric mean of posterior of instances inside a bag (arithmatic mean of log-posterior) and the expectation for a bag is taken inside the loss function.

For more information about Adaboost, see:

Yoav Freund, Robert E.
 class MIDD
          Re-implement the Diverse Density algorithm, changes the testing procedure.

Oded Maron (1998).
 class MIEMDD
          EMDD model builds heavily upon Dietterich's Diverse Density (DD) algorithm.
It is a general framework for MI learning of converting the MI problem to a single-instance setting using EM.
 class MILR
          Uses either standard or collective multi-instance assumption, but within linear regression.
 class MINND
          Multiple-Instance Nearest Neighbour with Distribution learner.

It uses gradient descent to find the weight for each dimension of each exeamplar from the starting point of 1.0.
 class MIOptimalBall
          This classifier tries to find a suitable ball in the multiple-instance space, with a certain data point in the instance space as a ball center.
 class MISMO
          Implements John Platt's sequential minimal optimization algorithm for training a support vector classifier.

This implementation globally replaces all missing values and transforms nominal attributes into binary ones.
 class MISVM
          Implements Stuart Andrews' mi_SVM (Maximum pattern Margin Formulation of MIL).
 class MIWrapper
          A simple Wrapper method for applying standard propositional learners to multi-instance data.

For more information see:

E.
 class SimpleMI
          Reduces MI data into mono-instance data.
 

Uses of CapabilitiesHandler in weka.classifiers.mi.supportVector
 

Classes in weka.classifiers.mi.supportVector that implement CapabilitiesHandler
 class MIPolyKernel
          The polynomial kernel : K(x, y) = <x, y>^p or K(x, y) = (<x, y>+1)^p

Valid options are:

 class MIRBFKernel
          The RBF kernel.
 

Uses of CapabilitiesHandler in weka.classifiers.misc
 

Classes in weka.classifiers.misc that implement CapabilitiesHandler
 class HyperPipes
          Class implementing a HyperPipe classifier.
 class SerializedClassifier
          A wrapper around a serialized classifier model.
 class VFI
          Classification by voting feature intervals.
 

Uses of CapabilitiesHandler in weka.classifiers.pmml.consumer
 

Classes in weka.classifiers.pmml.consumer that implement CapabilitiesHandler
 class GeneralRegression
          Class implementing import of PMML General Regression model.
 class NeuralNetwork
          Class implementing import of PMML Neural Network model.
 class PMMLClassifier
          Abstract base class for all PMML classifiers.
 class Regression
          Class implementing import of PMML Regression model.
 

Uses of CapabilitiesHandler in weka.classifiers.rules
 

Classes in weka.classifiers.rules that implement CapabilitiesHandler
 class ConjunctiveRule
          This class implements a single conjunctive rule learner that can predict for numeric and nominal class labels.

A rule consists of antecedents "AND"ed together and the consequent (class value) for the classification/regression.
 class DecisionTable
          Class for building and using a simple decision table majority classifier.

For more information see:

Ron Kohavi: The Power of Decision Tables.
 class DTNB
          Class for building and using a decision table/naive bayes hybrid classifier.
 class JRip
          This class implements a propositional rule learner, Repeated Incremental Pruning to Produce Error Reduction (RIPPER), which was proposed by William W.
 class M5Rules
          Generates a decision list for regression problems using separate-and-conquer.
 class NNge
          Nearest-neighbor-like algorithm using non-nested generalized exemplars (which are hyperrectangles that can be viewed as if-then rules).
 class OneR
          Class for building and using a 1R classifier; in other words, uses the minimum-error attribute for prediction, discretizing numeric attributes.
 class PART
          Class for generating a PART decision list.
 class Prism
          Class for building and using a PRISM rule set for classification.
 class Ridor
          An implementation of a RIpple-DOwn Rule learner.

It generates a default rule first and then the exceptions for the default rule with the least (weighted) error rate.
 class ZeroR
          Class for building and using a 0-R classifier.
 

Uses of CapabilitiesHandler in weka.classifiers.rules.part
 

Classes in weka.classifiers.rules.part that implement CapabilitiesHandler
 class MakeDecList
          Class for handling a decision list.
 

Uses of CapabilitiesHandler in weka.classifiers.trees
 

Classes in weka.classifiers.trees that implement CapabilitiesHandler
 class ADTree
          Class for generating an alternating decision tree.
 class BFTree
          Class for building a best-first decision tree classifier.
 class DecisionStump
          Class for building and using a decision stump.
 class FT
          Classifier for building 'Functional trees', which are classification trees that could have logistic regression functions at the inner nodes and/or leaves.
 class Id3
          Class for constructing an unpruned decision tree based on the ID3 algorithm.
 class J48
          Class for generating a pruned or unpruned C4.5 decision tree.
 class J48graft
          Class for generating a grafted (pruned or unpruned) C4.5 decision tree.
 class LADTree
          Class for generating a multi-class alternating decision tree using the LogitBoost strategy.
 class LMT
          Classifier for building 'logistic model trees', which are classification trees with logistic regression functions at the leaves.
 class M5P
          M5Base.
 class NBTree
          Class for generating a decision tree with naive Bayes classifiers at the leaves.

For more information, see

Ron Kohavi: Scaling Up the Accuracy of Naive-Bayes Classifiers: A Decision-Tree Hybrid.
 class RandomForest
          Class for constructing a forest of random trees.

For more information see:

Leo Breiman (2001).
 class RandomTree
          Class for constructing a tree that considers K randomly chosen attributes at each node.
 class REPTree
          Fast decision tree learner.
 class SimpleCart
          Class implementing minimal cost-complexity pruning.
Note when dealing with missing values, use "fractional instances" method instead of surrogate split method.

For more information, see:

Leo Breiman, Jerome H.
 class UserClassifier
          Interactively classify through visual means.
 

Uses of CapabilitiesHandler in weka.classifiers.trees.ft
 

Classes in weka.classifiers.trees.ft that implement CapabilitiesHandler
 class FTInnerNode
          Class for Functional Inner tree structure.
 class FTLeavesNode
          Class for Functional Leaves tree version.
 class FTNode
          Class for Functional tree structure.
 class FTtree
          Abstract class for Functional tree structure.
 

Uses of CapabilitiesHandler in weka.classifiers.trees.j48
 

Classes in weka.classifiers.trees.j48 that implement CapabilitiesHandler
 class C45PruneableClassifierTree
          Class for handling a tree structure that can be pruned using C4.5 procedures.
 class C45PruneableClassifierTreeG
          Class for handling a tree structure that can be pruned using C4.5 procedures and have nodes grafted on.
 class ClassifierTree
          Class for handling a tree structure used for classification.
 class NBTreeClassifierTree
          Class for handling a naive bayes tree structure used for classification.
 class PruneableClassifierTree
          Class for handling a tree structure that can be pruned using a pruning set.
 

Uses of CapabilitiesHandler in weka.classifiers.trees.lmt
 

Classes in weka.classifiers.trees.lmt that implement CapabilitiesHandler
 class LMTNode
          Class for logistic model tree structure.
 class LogisticBase
          Base/helper class for building logistic regression models with the LogitBoost algorithm.
 

Uses of CapabilitiesHandler in weka.classifiers.trees.m5
 

Classes in weka.classifiers.trees.m5 that implement CapabilitiesHandler
 class M5Base
          M5Base.
 class PreConstructedLinearModel
          This class encapsulates a linear regression function.
 class RuleNode
          Constructs a node for use in an m5 tree or rule
 

Uses of CapabilitiesHandler in weka.clusterers
 

Classes in weka.clusterers that implement CapabilitiesHandler
 class AbstractClusterer
          Abstract clusterer.
 class AbstractDensityBasedClusterer
          Abstract clustering model that produces (for each test instance) an estimate of the membership in each cluster (ie.
 class CLOPE
          Yiling Yang, Xudong Guan, Jinyuan You: CLOPE: a fast and effective clustering algorithm for transactional data.
 class Cobweb
          Class implementing the Cobweb and Classit clustering algorithms.

Note: the application of node operators (merging, splitting etc.) in terms of ordering and priority differs (and is somewhat ambiguous) between the original Cobweb and Classit papers.
 class DBScan
          Martin Ester, Hans-Peter Kriegel, Joerg Sander, Xiaowei Xu: A Density-Based Algorithm for Discovering Clusters in Large Spatial Databases with Noise.
 class EM
          Simple EM (expectation maximisation) class.

EM assigns a probability distribution to each instance which indicates the probability of it belonging to each of the clusters.
 class FarthestFirst
          Cluster data using the FarthestFirst algorithm.

For more information see:

Hochbaum, Shmoys (1985).
 class FilteredClusterer
          Class for running an arbitrary clusterer on data that has been passed through an arbitrary filter.
 class HierarchicalClusterer
          Hierarchical clustering class.
 class MakeDensityBasedClusterer
          Class for wrapping a Clusterer to make it return a distribution and density.
 class OPTICS
          Mihael Ankerst, Markus M.
 class RandomizableClusterer
          Abstract utility class for handling settings common to randomizable clusterers.
 class RandomizableDensityBasedClusterer
          Abstract utility class for handling settings common to randomizable clusterers.
 class RandomizableSingleClustererEnhancer
          Abstract utility class for handling settings common to randomizable clusterers.
 class sIB
          Cluster data using the sequential information bottleneck algorithm.

Note: only hard clustering scheme is supported.
 class SimpleKMeans
          Cluster data using the k means algorithm

Valid options are:

 class SingleClustererEnhancer
          Meta-clusterer for enhancing a base clusterer.
 class XMeans
          Cluster data using the X-means algorithm.

X-Means is K-Means extended by an Improve-Structure part In this part of the algorithm the centers are attempted to be split in its region.
 

Uses of CapabilitiesHandler in weka.core
 

Subinterfaces of CapabilitiesHandler in weka.core
 interface MultiInstanceCapabilitiesHandler
          Multi-Instance classifiers can specify an additional Capabilities object for the data in the relational attribute, since the format of multi-instance data is fixed to "bag/NOMINAL,data/RELATIONAL,class".
 

Classes in weka.core that implement CapabilitiesHandler
 class FindWithCapabilities
          Locates all classes with certain capabilities.
 

Methods in weka.core that return CapabilitiesHandler
 CapabilitiesHandler TestInstances.getHandler()
          returns the current set CapabilitiesHandler to generate the dataset for, can be null
 CapabilitiesHandler FindWithCapabilities.getHandler()
          returns the current set CapabilitiesHandler to generate the dataset for, can be null.
 CapabilitiesHandler Capabilities.getOwner()
          returns the owner of this capabilities object
 

Methods in weka.core with parameters of type CapabilitiesHandler
 void TestInstances.setHandler(CapabilitiesHandler value)
          sets the Capabilities handler to generate the data for
 void FindWithCapabilities.setHandler(CapabilitiesHandler value)
          sets the Capabilities handler to generate the data for.
 void Capabilities.setOwner(CapabilitiesHandler value)
          sets the owner of this capabilities object
 

Constructors in weka.core with parameters of type CapabilitiesHandler
Capabilities(CapabilitiesHandler owner)
          initializes the capabilities for the given owner
 

Uses of CapabilitiesHandler in weka.core.converters
 

Classes in weka.core.converters that implement CapabilitiesHandler
 class AbstractFileSaver
          Abstract class for Savers that save to a file Valid options are: -i input arff file
The input filw in arff format.
 class AbstractSaver
          Abstract class for Saver
 class ArffSaver
          Writes to a destination in arff text format.
 class C45Saver
          Writes to a destination that is in the format used by the C4.5 algorithm.
Therefore it outputs a names and a data file.
 class CSVSaver
          Writes to a destination that is in csv format

Valid options are:

 class DatabaseSaver
          Writes to a database (tested with MySQL, InstantDB, HSQLDB).
 class LibSVMSaver
          Writes to a destination that is in libsvm format.

For more information about libsvm see:

http://www.csie.ntu.edu.tw/~cjlin/libsvm/

Valid options are:

 class SerializedInstancesSaver
          Serializes the instances to a file with extension bsi.
 class SVMLightSaver
          Writes to a destination that is in svm light format.

For more information about svm light see:

http://svmlight.joachims.org/

Valid options are:

 class XRFFSaver
          Writes to a destination that is in the XML version of the ARFF format.
 

Uses of CapabilitiesHandler in weka.estimators
 

Classes in weka.estimators that implement CapabilitiesHandler
 class DiscreteEstimator
          Simple symbolic probability estimator based on symbol counts.
 class Estimator
          Abstract class for all estimators.
 class KernelEstimator
          Simple kernel density estimator.
 class MahalanobisEstimator
          Simple probability estimator that places a single normal distribution over the observed values.
 class NormalEstimator
          Simple probability estimator that places a single normal distribution over the observed values.
 class PoissonEstimator
          Simple probability estimator that places a single Poisson distribution over the observed values.
 

Uses of CapabilitiesHandler in weka.filters
 

Classes in weka.filters that implement CapabilitiesHandler
 class AllFilter
          A simple instance filter that passes all instances directly through.
 class Filter
          An abstract class for instance filters: objects that take instances as input, carry out some transformation on the instance and then output the instance.
 class MultiFilter
          Applies several filters successively.
 class SimpleBatchFilter
          This filter is a superclass for simple batch filters.
 class SimpleFilter
          This filter contains common behavior of the SimpleBatchFilter and the SimpleStreamFilter.
 class SimpleStreamFilter
          This filter is a superclass for simple stream filters.
 

Uses of CapabilitiesHandler in weka.filters.supervised.attribute
 

Classes in weka.filters.supervised.attribute that implement CapabilitiesHandler
 class AddClassification
          A filter for adding the classification, the class distribution and an error flag to a dataset with a classifier.
 class AttributeSelection
          A supervised attribute filter that can be used to select attributes.
 class ClassOrder
          Changes the order of the classes so that the class values are no longer of in the order specified in the header.
 class Discretize
          An instance filter that discretizes a range of numeric attributes in the dataset into nominal attributes.
 class NominalToBinary
          Converts all nominal attributes into binary numeric attributes.
 class PLSFilter
          Runs Partial Least Square Regression over the given instances and computes the resulting beta matrix for prediction.
By default it replaces missing values and centers the data.

For more information see:

Tormod Naes, Tomas Isaksson, Tom Fearn, Tony Davies (2002).
 

Uses of CapabilitiesHandler in weka.filters.supervised.instance
 

Classes in weka.filters.supervised.instance that implement CapabilitiesHandler
 class Resample
          Produces a random subsample of a dataset using either sampling with replacement or without replacement.
The original dataset must fit entirely in memory.
 class SMOTE
          Resamples a dataset by applying the Synthetic Minority Oversampling TEchnique (SMOTE).
 class SpreadSubsample
          Produces a random subsample of a dataset.
 class StratifiedRemoveFolds
          This filter takes a dataset and outputs a specified fold for cross validation.
 

Uses of CapabilitiesHandler in weka.filters.unsupervised.attribute
 

Classes in weka.filters.unsupervised.attribute that implement CapabilitiesHandler
 class AbstractTimeSeries
          An abstract instance filter that assumes instances form time-series data and performs some merging of attribute values in the current instance with attribute attribute values of some previous (or future) instance.
 class Add
          An instance filter that adds a new attribute to the dataset.
 class AddCluster
          A filter that adds a new nominal attribute representing the cluster assigned to each instance by the specified clustering algorithm.
 class AddExpression
          An instance filter that creates a new attribute by applying a mathematical expression to existing attributes.
 class AddID
          An instance filter that adds an ID attribute to the dataset.
 class AddNoise
          An instance filter that changes a percentage of a given attributes values.
 class AddValues
          Adds the labels from the given list to an attribute if they are missing.
 class Center
          Centers all numeric attributes in the given dataset to have zero mean (apart from the class attribute, if set).
 class ChangeDateFormat
          Changes the date format used by a date attribute.
 class ClassAssigner
          Filter that can set and unset the class index.
 class ClusterMembership
          A filter that uses a density-based clusterer to generate cluster membership values; filtered instances are composed of these values plus the class attribute (if set in the input data).
 class Copy
          An instance filter that copies a range of attributes in the dataset.
 class FirstOrder
          This instance filter takes a range of N numeric attributes and replaces them with N-1 numeric attributes, the values of which are the difference between consecutive attribute values from the original instance.
 class InterquartileRange
          A filter for detecting outliers and extreme values based on interquartile ranges.
 class KernelFilter
          Converts the given set of predictor variables into a kernel matrix.
 class MakeIndicator
          A filter that creates a new dataset with a boolean attribute replacing a nominal attribute.
 class MathExpression
          Modify numeric attributes according to a given expression

Valid options are:

 class MergeTwoValues
          Merges two values of a nominal attribute into one value.
 class MultiInstanceToPropositional
          Converts the multi-instance dataset into single instance dataset so that the Nominalize, Standardize and other type of filters or transformation can be applied to these data for the further preprocessing.
Note: the first attribute of the converted dataset is a nominal attribute and refers to the bagId.
 class NominalToString
          Converts a nominal attribute (i.e.
 class NumericCleaner
          A filter that 'cleanses' the numeric data from values that are too small, too big or very close to a certain value (e.g., 0) and sets these values to a pre-defined default.
 class NumericToBinary
          Converts all numeric attributes into binary attributes (apart from the class attribute, if set): if the value of the numeric attribute is exactly zero, the value of the new attribute will be zero.
 class NumericToNominal
          A filter for turning numeric attributes into nominal ones.
 class NumericTransform
          Transforms numeric attributes using a given transformation method.
 class Obfuscate
          A simple instance filter that renames the relation, all attribute names and all nominal (and string) attribute values.
 class PartitionedMultiFilter
          A filter that applies filters on subsets of attributes and assembles the output into a new dataset.
 class PKIDiscretize
          Discretizes numeric attributes using equal frequency binning, where the number of bins is equal to the square root of the number of non-missing values.

For more information, see:

Ying Yang, Geoffrey I.
 class PotentialClassIgnorer
          This filter should be extended by other unsupervised attribute filters to allow processing of the class attribute if that's required.
 class PrincipalComponents
          Performs a principal components analysis and transformation of the data.
Dimensionality reduction is accomplished by choosing enough eigenvectors to account for some percentage of the variance in the original data -- default 0.95 (95%).
Based on code of the attribute selection scheme 'PrincipalComponents' by Mark Hall and Gabi Schmidberger.
 class PropositionalToMultiInstance
          Converts the propositional instance dataset into multi-instance dataset (with relational attribute).
 class RandomProjection
          Reduces the dimensionality of the data by projecting it onto a lower dimensional subspace using a random matrix with columns of unit length (i.e.
 class RandomSubset
          Chooses a random subset of attributes, either an absolute number or a percentage.
 class RELAGGS
          A propositionalization filter inspired by the RELAGGS algorithm.
It processes all relational attributes that fall into the user defined range (all others are skipped, i.e., not added to the output).
 class Remove
          A filter that removes a range of attributes from the dataset.
 class RemoveType
          Removes attributes of a given type.
 class RemoveUseless
          This filter removes attributes that do not vary at all or that vary too much.
 class Reorder
          A filter that generates output with a new order of the attributes.
 class ReplaceMissingValues
          Replaces all missing values for nominal and numeric attributes in a dataset with the modes and means from the training data.
 class Standardize
          Standardizes all numeric attributes in the given dataset to have zero mean and unit variance (apart from the class attribute, if set).
 class StringToNominal
          Converts a string attribute (i.e.
 class StringToWordVector
          Converts String attributes into a set of attributes representing word occurrence (depending on the tokenizer) information from the text contained in the strings.
 class SwapValues
          Swaps two values of a nominal attribute.
 class TimeSeriesDelta
          An instance filter that assumes instances form time-series data and replaces attribute values in the current instance with the difference between the current value and the equivalent attribute attribute value of some previous (or future) instance.
 class TimeSeriesTranslate
          An instance filter that assumes instances form time-series data and replaces attribute values in the current instance with the equivalent attribute values of some previous (or future) instance.
 class Wavelet
          A filter for wavelet transformation.

For more information see:

Wikipedia (2004).
 

Uses of CapabilitiesHandler in weka.filters.unsupervised.instance
 

Classes in weka.filters.unsupervised.instance that implement CapabilitiesHandler
 class NonSparseToSparse
          An instance filter that converts all incoming instances into sparse format.
 class Normalize
          An instance filter that normalize instances considering only numeric attributes and ignoring class index.
 class Randomize
          Randomly shuffles the order of instances passed through it.
 class RemoveFolds
          This filter takes a dataset and outputs a specified fold for cross validation.
 class RemoveFrequentValues
          Determines which values (frequent or infrequent ones) of an (nominal) attribute are retained and filters the instances accordingly.
 class RemoveMisclassified
          A filter that removes instances which are incorrectly classified.
 class RemovePercentage
          A filter that removes a given percentage of a dataset.
 class RemoveRange
          A filter that removes a given range of instances of a dataset.
 class RemoveWithValues
          Filters instances according to the value of an attribute.
 class ReservoirSample
          Produces a random subsample of a dataset using the reservoir sampling Algorithm "R" by Vitter.
 class SparseToNonSparse
          An instance filter that converts all incoming sparse instances into non-sparse format.
 class SubsetByExpression
          Filters instances according to a user-specified expression.

Grammar:

boolexpr_list ::= boolexpr_list boolexpr_part | boolexpr_part;

boolexpr_part ::= boolexpr:e {: parser.setResult(e); :} ;

boolexpr ::= BOOLEAN
| true
| false
| expr < expr
| expr <= expr
| expr > expr
| expr >= expr
| expr = expr
| ( boolexpr )
| not boolexpr
| boolexpr and boolexpr
| boolexpr or boolexpr
| ATTRIBUTE is STRING
;

expr ::= NUMBER
| ATTRIBUTE
| ( expr )
| opexpr
| funcexpr
;

opexpr ::= expr + expr
| expr - expr
| expr * expr
| expr / expr
;

funcexpr ::= abs ( expr )
| sqrt ( expr )
| log ( expr )
| exp ( expr )
| sin ( expr )
| cos ( expr )
| tan ( expr )
| rint ( expr )
| floor ( expr )
| pow ( expr for base , expr for exponent )
| ceil ( expr )
;

Notes:
- NUMBER
any integer or floating point number
(but not in scientific notation!)
- STRING
any string surrounded by single quotes;
the string may not contain a single quote though.
- ATTRIBUTE
the following placeholders are recognized for
attribute values:
- CLASS for the class value in case a class attribute is set.
- ATTxyz with xyz a number from 1 to # of attributes in the
dataset, representing the value of indexed attribute.

Examples:
- extracting only mammals and birds from the 'zoo' UCI dataset:
(CLASS is 'mammal') or (CLASS is 'bird')
- extracting only animals with at least 2 legs from the 'zoo' UCI dataset:
(ATT14 >= 2)
- extracting only instances with non-missing 'wage-increase-second-year'
from the 'labor' UCI dataset:
not ismissing(ATT3)

Valid options are:

 



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