Package adams.data.filter.heatmapthreshold

Class AbstractBufferedImageBasedHeatmapThreshold

java.lang.Object

adams.core.logging.LoggingObject

adams.core.logging.CustomLoggingLevelObject

adams.core.option.AbstractOptionHandler

adams.data.filter.heatmapthreshold.AbstractHeatmapThreshold

adams.data.filter.heatmapthreshold.AbstractBufferedImageBasedHeatmapThreshold

All Implemented Interfaces:

adams.core.Destroyable, adams.core.GlobalInfoSupporter, adams.core.logging.LoggingLevelHandler, adams.core.logging.LoggingSupporter, adams.core.option.OptionHandler, adams.core.SizeOfHandler, Serializable

Direct Known Subclasses:

Otsu

public abstract class AbstractBufferedImageBasedHeatmapThreshold
extends AbstractHeatmapThreshold

Ancestor of threshold algorithms that use a BufferedImage as basis for their calculation.

Version:

$Revision$

Author:

FracPete (fracpete at waikato dot ac dot nz)

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected HeatmapToBufferedImageConversion	m_Conversion	for generating the BufferedImage.

Fields inherited from class adams.core.option.AbstractOptionHandler

m_OptionManager

Fields inherited from class adams.core.logging.LoggingObject

m_Logger, m_LoggingIsEnabled, m_LoggingLevel

Constructor Summary

Constructors

Constructor	Description
AbstractBufferedImageBasedHeatmapThreshold()

Method Summary

Modifier and Type	Method	Description
String	conversionTipText()	Returns the tip text for this property.
void	defineOptions()	Adds options to the internal list of options.
protected double	doCalcThreshold(Heatmap map)	Performs the actual calculation of the threshold.
protected abstract double	doCalcThreshold(Heatmap map, BufferedImage img)	Performs the actual calculation of the threshold using the image.
HeatmapToBufferedImageConversion	getConversion()	Returns the conversion to use for turning the heatmap into a BufferedImage.
void	setConversion(HeatmapToBufferedImageConversion value)	Sets the conversion to use for turning the heatmap into a BufferedImage.

Methods inherited from class adams.data.filter.heatmapthreshold.AbstractHeatmapThreshold

calcThreshold, check

Methods inherited from class adams.core.option.AbstractOptionHandler

cleanUpOptions, destroy, finishInit, getDefaultLoggingLevel, getOptionManager, globalInfo, initialize, loggingLevelTipText, newOptionManager, reset, setLoggingLevel, toCommandLine, toString

Methods inherited from class adams.core.logging.LoggingObject

configureLogger, getLogger, getLoggingLevel, initializeLogging, isLoggingEnabled, sizeOf

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface adams.core.logging.LoggingLevelHandler

getLoggingLevel

Field Detail

m_Conversion

protected HeatmapToBufferedImageConversion m_Conversion

for generating the BufferedImage.

Constructor Detail

AbstractBufferedImageBasedHeatmapThreshold

public AbstractBufferedImageBasedHeatmapThreshold()

Method Detail

defineOptions

public void defineOptions()

Adds options to the internal list of options.

Specified by:

defineOptions in interface adams.core.option.OptionHandler

Overrides:

defineOptions in class adams.core.option.AbstractOptionHandler

setConversion

public void setConversion(HeatmapToBufferedImageConversion value)

Sets the conversion to use for turning the heatmap into a BufferedImage.

Parameters:

value - the conversion

getConversion

public HeatmapToBufferedImageConversion getConversion()

Returns the conversion to use for turning the heatmap into a BufferedImage.

Returns:

the conversion

conversionTipText

public String conversionTipText()

Returns the tip text for this property.

Returns:

tip text for this property suitable for displaying in the GUI or for listing the options.

doCalcThreshold

protected abstract double doCalcThreshold(Heatmap map,
                                          BufferedImage img)

Performs the actual calculation of the threshold using the image.

Parameters:

map - the original heatmap

img - the generated image to use

Returns:

the threshold

doCalcThreshold

protected double doCalcThreshold(Heatmap map)

Performs the actual calculation of the threshold.

Specified by:

doCalcThreshold in class AbstractHeatmapThreshold

Parameters:

map - the map to base the calculation on

Returns:

the threshold