Package adams.data.io.input

Class AbstractTextBasedSpectrumReader

java.lang.Object

adams.core.logging.LoggingObject

adams.core.logging.CustomLoggingLevelObject

adams.core.option.AbstractOptionHandler

adams.data.io.input.AbstractDataContainerReader<Spectrum>

adams.data.io.input.AbstractSpectrumReader

adams.data.io.input.AbstractTextBasedSpectrumReader

All Implemented Interfaces:

adams.core.AdditionalInformationHandler, adams.core.CleanUpHandler, adams.core.Destroyable, adams.core.GlobalInfoSupporter, adams.core.io.FileFormatHandler, adams.core.logging.LoggingLevelHandler, adams.core.logging.LoggingSupporter, adams.core.option.OptionHandler, adams.core.ShallowCopySupporter<adams.data.io.input.DataContainerReader>, adams.core.SizeOfHandler, adams.core.Stoppable, adams.data.io.input.DataContainerReader<Spectrum>, adams.data.io.input.StreamableDataContainerReader<Spectrum>, adams.data.io.input.StreamableTextBasedDataContainerReader<Spectrum>, Serializable, Comparable

Direct Known Subclasses:

ASCIIXYSpectrumReader, ASCSpectrumReader, DPTSpectrumReader, JCampDX2SpectrumReader, JsonSpectrumReader, MPSSpectrumReader, RelabSpectrumReader, SpecLibSpectrumReader, TrinamixSpectrumJsonReader, TrinamixSpectrumReader

public abstract class AbstractTextBasedSpectrumReader
extends AbstractSpectrumReader
implements adams.data.io.input.StreamableTextBasedDataContainerReader<Spectrum>

Ancestor for spectrum readers that are text-based.

Author:

fracpete (fracpete at waikato dot ac dot nz)

See Also:

Serialized Form

Field Summary

Fields inherited from class adams.data.io.input.AbstractSpectrumReader

m_Format, m_Instrument, m_KeepFormat, m_Stopped, m_UseAbsoluteSource, OPTION_OUTPUTDIR

Fields inherited from class adams.data.io.input.AbstractDataContainerReader

m_CreateDummyReport, m_Input, m_InputIsFile, m_Processed, m_ReadData

Fields inherited from class adams.core.option.AbstractOptionHandler

m_OptionManager

Fields inherited from class adams.core.logging.LoggingObject

m_Logger, m_LoggingIsEnabled, m_LoggingLevel

Constructor Summary

Constructors

Constructor	Description
AbstractTextBasedSpectrumReader()

Method Summary

Modifier and Type	Method	Description
List<Spectrum>	read(InputStream input)	Returns the data containers generated from the input stream.
protected void	readData()	Performs the actual reading.
protected abstract void	readData(List<String> content)	Performs the actual reading.

Methods inherited from class adams.data.io.input.AbstractSpectrumReader

checkData, createDummyReport, defineOptions, formatTipText, getDefaultFormat, getDefaultInstrument, getDefaultKeepFormat, getDefaultUseAbsoluteSource, getFormat, getInstrument, getKeepFormat, getReaders, getUseAbsoluteSource, instrumentTipText, keepFormatTipText, postProcessData, runReader, setFormat, setInstrument, setKeepFormat, setUseAbsoluteSource, stopExecution, useAbsoluteSourceTipText

Methods inherited from class adams.data.io.input.AbstractDataContainerReader

cleanUp, compareTo, createDummyReportTipText, destroy, doRead, equals, getAdditionalInformation, getCreateDummyReport, getDefaultFormatExtension, getFormatDescription, getFormatExtensions, getInput, initialize, inputTipText, isInputFile, read, reset, setCreateDummyReport, setInput, shallowCopy, shallowCopy

Methods inherited from class adams.core.option.AbstractOptionHandler

cleanUpOptions, finishInit, getDefaultLoggingLevel, getOptionManager, globalInfo, loggingLevelTipText, newOptionManager, setLoggingLevel, toCommandLine, toString

Methods inherited from class adams.core.logging.LoggingObject

configureLogger, getLogger, getLoggingLevel, initializeLogging, isLoggingEnabled, sizeOf

Methods inherited from class java.lang.Object

clone, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface adams.core.AdditionalInformationHandler

getAdditionalInformation

Methods inherited from interface adams.core.CleanUpHandler

cleanUp

Methods inherited from interface java.lang.Comparable

compareTo

Methods inherited from interface adams.data.io.input.DataContainerReader

createDummyReportTipText, getCreateDummyReport, getInput, inputTipText, isInputFile, read, setCreateDummyReport, setInput

Methods inherited from interface adams.core.Destroyable

destroy

Methods inherited from interface adams.core.io.FileFormatHandler

getDefaultFormatExtension, getFormatDescription, getFormatExtensions

Methods inherited from interface adams.core.logging.LoggingLevelHandler

getLoggingLevel

Methods inherited from interface adams.core.option.OptionHandler

cleanUpOptions, defineOptions, getOptionManager, toCommandLine

Methods inherited from interface adams.core.ShallowCopySupporter

shallowCopy, shallowCopy

Constructor Detail

AbstractTextBasedSpectrumReader

public AbstractTextBasedSpectrumReader()

Method Detail

readData

protected abstract void readData(List<String> content)

Performs the actual reading.

Parameters:

content - the content to read from

readData

protected void readData()

Performs the actual reading.

Specified by:

readData in class adams.data.io.input.AbstractDataContainerReader<Spectrum>

read

public List<Spectrum> read(InputStream input)

Returns the data containers generated from the input stream.

Specified by:

read in interface adams.data.io.input.StreamableDataContainerReader<Spectrum>

Parameters:

input - the stream to read from

Returns:

the data generated from the stream