Package adams.data.sampledata

Class SampleData

  • All Implemented Interfaces:
    adams.core.CloneHandler<adams.data.report.Report>, adams.core.logging.LoggingSupporter, adams.core.Mergeable<adams.data.report.Report>, adams.core.SizeOfHandler, adams.data.id.DatabaseIDHandler, adams.data.id.IDHandler, adams.data.id.MutableDatabaseIDHandler, adams.data.id.MutableIDHandler, adams.data.spreadsheet.SpreadSheetSupporter, Serializable, Comparable
    public class SampleData
extends adams.data.report.Report
implements adams.data.id.MutableIDHandler
    Read and store data from the Sample Report.
    Version:
    $Revision: 11831 $
    Author:
    dale
    See Also:
    Serialized Form

    • Field Summary

      Fields 
      Modifier and Type Field Description
      static String DEFAULT_FORMAT
      the default data type.
      static String DEFAULT_INSTRUMENT
      the default instrument ('unknown').
      static String FORMAT
      field name for the format.
      static String INSERT_TIMESTAMP
      field name for time of insertion into database.
      static String INSTRUMENT
      field name for the instrument.
      static String SAMPLE_ID
      field name for the sample ID.
      static String SAMPLE_TYPE
      field name for the sample type.
      static String SOURCE
      field name for the source.

      • Fields inherited from class adams.data.report.Report

        DATATYPE_SUFFIX, FIELD_DUMMYREPORT, FIELD_EXCLUDED, m_DatabaseID, m_Fields, m_Params, PROPERTY_PARENTID

      • Fields inherited from class adams.core.logging.LoggingObject

        m_Logger, m_LoggingIsEnabled, m_LoggingLevel

    • Constructor Summary

      Constructors 
      Constructor Description
      SampleData()  

    • Method Summary

      All Methods Static Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      static SampleData createDummy​(String instrument, Date insertDate, String format)
      Creates a dummy report.
      String getID()
      Returns the ID.
      protected void initFields()
      Set field types.
      static SampleData parseProperties​(adams.core.Properties props)
      Parses the properties (generated with the toProperties() method) and generates a sample data object from it.
      static SampleData parseReport​(String s)
      Parses the string generated by the toString() method.
      void setID​(String value)
      Sets the ID.
      void update()
      Updates certain dependant fields.

      • Methods inherited from class adams.data.report.Report

        addField, addParameter, addParameter, assign, compareTo, equals, getBooleanValue, getBooleanValue, getClone, getDatabaseID, getDoubleValue, getDoubleValue, getFields, getFields, getFields, getFieldType, getLoggingLevel, getParams, getPrefixFields, getStringValue, getStringValue, getSuffixFields, getValue, hasField, hasField, hashCode, hasValue, hasValue, hasValues, hasValues, intersect, isDummyReport, mergeWith, minus, newInstance, removeValue, removeValues, removeValuesStartingWith, setBooleanValue, setDatabaseID, setDummyReport, setLoggingLevel, setNumericValue, setParams, setStringValue, setValue, toProperties, toSpreadSheet, toString

      • Methods inherited from class adams.core.logging.LoggingObject

        configureLogger, getLogger, initializeLogging, isLoggingEnabled, sizeOf

    • Constructor Detail

      • SampleData

        public SampleData()

    • Method Detail

      • update

        public void update()
        Updates certain dependant fields. This method should be called before saving it to the database, after loading it from the database or when a quantitation report has been created by hand.
        Overrides:
        update in class adams.data.report.Report

      • createDummy

        public static SampleData createDummy​(String instrument,
                                     Date insertDate,
                                     String format)
        Creates a dummy report.
        Parameters:
        instrument - the instrument this dummy is for
        insertDate - the date for the insertion in the database
        format - the format of the data
        Returns:
        the generated report

      • parseReport

        public static SampleData parseReport​(String s)
        Parses the string generated by the toString() method.
        Parameters:
        s - the string to parse
        Returns:
        the generated report

      • parseProperties

        public static SampleData parseProperties​(adams.core.Properties props)
        Parses the properties (generated with the toProperties() method) and generates a sample data object from it.
        Parameters:
        props - the properties to generate the sample data from
        Returns:
        the sample data

      • initFields

        protected void initFields()
        Set field types.
        Overrides:
        initFields in class adams.data.report.Report

      • getID

        public String getID()
        Returns the ID.
        Specified by:
        getID in interface adams.data.id.IDHandler
        Returns:
        the ID

      • setID

        public void setID​(String value)
        Sets the ID.
        Specified by:
        setID in interface adams.data.id.MutableIDHandler
        Parameters:
        value - the ID