Uses of Interface
adams.core.CrossReference

Packages that use CrossReference

Package	Description
adams.core
adams.data.conversion
adams.data.filter
adams.data.image.multiimageoperation
adams.data.io.output
adams.flow.condition.bool
adams.flow.control
adams.flow.sink
adams.flow.source
adams.flow.standalone
adams.flow.transformer
adams.scripting.command.basic

Uses of CrossReference in adams.core

Subinterfaces of CrossReference in adams.core

Modifier and Type	Interface	Description
interface	ClassCrossReference	Interface for object that cross-reference other classes.

Uses of CrossReference in adams.data.conversion

Classes in adams.data.conversion that implement CrossReference

Modifier and Type	Class	Description
class	BackQuote	Backquotes, i.e., escapes with a backslash, characters like quotes (single and double), new lines, tabs. See also: adams.data.conversion.Quote adams.data.conversion.UnQuote adams.data.conversion.UnBackQuote Valid options are:
class	PrettyPrintXML	Turns the XML string into a pretty-printed XML string. See also: adams.data.conversion.XMLToDOM adams.data.conversion.DOMToString
class	Quote	Surrounds a string with quotes (single or double), if necessary due to blanks or other characters (new line, tab) in the string. However, you can also 'force' the quoting. See also: adams.data.conversion.UnQuote adams.data.conversion.BackQuote adams.data.conversion.UnBackQuote
class	TextRenderer	Turns incoming objects into their textual representation, either automatic detection based on their data type or by explicitly specifying a renderer. See also: adams.flow.transformer.TextRenderer
class	UnBackQuote	Reverses backquoting, i.e., removes the escaping with backslash, restoring characters like quotes (single and double), new lines, tabs. See also: adams.data.conversion.Quote adams.data.conversion.UnQuote adams.data.conversion.BackQuote Valid options are:
class	UnQuote	Removes the quotes (single or double) surrounding a string.

Uses of CrossReference in adams.data.filter

Classes in adams.data.filter that implement CrossReference

Modifier and Type	Class	Description
class	TimeseriesSAX	Performs Symbolic Aggregate approXimation (SAX). The data must be normalized using adams.data.filter.RowNorm beforehand. For more information see: Chiu, B., Keogh, E., Lonardi, S.

Uses of CrossReference in adams.data.image.multiimageoperation

Classes in adams.data.image.multiimageoperation that implement CrossReference

Modifier and Type	Class	Description
class	MergeGrid	Merges a grid of sub-images into a single image, including the annotations. Opposite operation to adams.data.image.transformer.subimages.Grid. Expects the image array to represent the cells in the grid in a row-wise fashion. Only combines object annotations from reports, other field values will be discarded. Does not remove overlapping objects, see adams.flow.transformer.DeleteOverlappingImageObjects. See also: adams.data.image.transformer.subimages.Grid adams.flow.transformer.DeleteOverlappingImageObjects

Uses of CrossReference in adams.data.io.output

Classes in adams.data.io.output that implement CrossReference

Modifier and Type	Class	Description
class	GrayOrIndexedImageWriter	Changes the unique colors to the ones specified by the color provider. Useful for generating human-viewable images from image segmentation annotations. Uses adams.data.io.output.ApacheCommonsImageWriter for performing the actual writing after the conversion. See also: adams.data.io.output.ApacheCommonsImageWriter

Uses of CrossReference in adams.flow.condition.bool

Classes in adams.flow.condition.bool that implement CrossReference

Modifier and Type	Class	Description
class	HashSet	Evaluates to true if the payload of the current token or the specified string (if non-empty) is present in the specified hashset. The value gets transformed using the specified conversion. See also: adams.flow.standalone.HashSetInit adams.flow.transformer.HashSetInit

Uses of CrossReference in adams.flow.control

Classes in adams.flow.control that implement CrossReference

Modifier and Type	Class	Description
class	ForceFlush	Forces all actors that implement adams.flow.core.FlushSupporter See also: adams.flow.sink.DumpFile Input/output: - accepts: adams.flow.core.Unknown - generates: adams.flow.core.Unknown
class	RaiseError	Raises a java.lang.Error if the condition evaluates to 'true', using the provided error message. See also: adams.flow.control.TryCatch Input/output: - accepts: adams.flow.core.Unknown - generates: adams.flow.core.Unknown
class	TryCatch	Safe-guards the execution of the 'try' sequence of actors.

Uses of CrossReference in adams.flow.sink

Classes in adams.flow.sink that implement CrossReference

Modifier and Type	Class	Description
class	CloseInputStream	Closes the incoming input stream instance. See also: adams.flow.source.InputStreamGenerator Input/output: - accepts: java.io.InputStream
class	CloseReader	Closes the incoming reader instance. See also: adams.flow.source.ReaderGenerator Input/output: - accepts: java.io.Reader
class	PDFCloseDocument	Closes the incoming PDF document, writing out its content. The PDF document can be generated with adams.flow.source.PDFNewDocument and appended using adams.flow.transformer.PDFAppendDocument. See also: adams.flow.source.PDFNewDocument adams.flow.transformer.PDFAppendDocument Input/output: - accepts: adams.flow.transformer.pdfproclet.PDFGenerator
class	SequencePlotter	Actor that plots sequences over time. See also: adams.flow.sink.SimplePlot Input/output: - accepts: adams.flow.container.SequencePlotterContainer adams.flow.container.SequencePlotterContainer[] Container information: - adams.flow.container.SequencePlotterContainer: PlotName, X, Y, Content type, Error X, Error Y, MetaData
class	SimplePlot	Actor for generating simple plots. See also: adams.flow.sink.SequencePlotter Input/output: - accepts: adams.flow.container.SequencePlotterContainer adams.flow.container.SequencePlotterContainer[] Container information: - adams.flow.container.SequencePlotterContainer: PlotName, X, Y, Content type, Error X, Error Y, MetaData
class	Socket	Just outputs the data to the specified socket. Any incoming data that isn't a byte array gets converted to a string and its bytes (using the specified encoding) are then transmitted. See also: adams.flow.source.Socket Input/output: - accepts: java.lang.Object byte[] java.lang.Byte[]

Uses of CrossReference in adams.flow.source

Classes in adams.flow.source that implement CrossReference

Modifier and Type	Class	Description
class	Command	Runs an external system command and broadcasts the generated output (stdout and/or stderr) continuously, opposed to adams.flow.source.Exec which waits for the command to finish. See also: adams.flow.source.Exec Input/output: - generates: java.lang.String
class	Exec	Runs an external system command and broadcasts the generated output (stdout or stderr). See also: adams.flow.source.Exec Input/output: - generates: java.lang.String
class	FilenameGenerator	Uses the specified filename generator to output a filename. NB: Generators that require an object to pass through won't work with this source. See also: adams.flow.transformer.FilenameGenerator Input/output: - generates: java.lang.String
class	InputStreamGenerator	Uses the specified generator to instantiate an input stream instance. See also: adams.flow.sink.CloseInputStream Input/output: - generates: java.io.InputStream
class	PDFNewDocument	Creates an empty PDF document. Needs to be finalized with adams.flow.sink.PDFCloseDocument. The output of this source can be processed by adams.flow.transformer.PDFAppendDocument. See also: adams.flow.transformer.PDFAppendDocument adams.flow.sink.PDFCloseDocument Input/output: - generates: adams.flow.transformer.pdfproclet.PDFGenerator
class	ReaderGenerator	Uses the specified generator to instantiate a reader instance. See also: adams.flow.sink.CloseReader Input/output: - generates: java.io.InputStream
class	Socket	Listens on the specified port for incoming data. Can either output raw byte arrays or strings (using the specified encoding). See also: adams.flow.sink.Socket Input/output: - generates: byte[]

Uses of CrossReference in adams.flow.standalone

Classes in adams.flow.standalone that implement CrossReference

Modifier and Type	Class	Description
class	ExternalStandalone	Standalone that executes an external standalone actor stored on disk. For executing whole flows, use the adams.flow.standalone.ExternalFlow standalone actor instead. See also: adams.flow.standalone.ExternalFlow
class	HashSetInit	Creates an empty hashset in internal storage under the specified name. Initial string values can be supplied as well, which can be transformed using the specified conversion. See also: adams.flow.transformer.HashSetInit adams.flow.transformer.HashSetAdd adams.flow.source.HashSet adams.flow.condition.bool.HashSet
class	JobRunnerInstance	Acts as job execution pool for classes implementing adams.multiprocess.JobRunnerSupporter. See also: adams.multiprocess.JobRunnerSupporter
class	LookUpInit	Initializes an empty look up table in storage. See also: adams.flow.transformer.LookUpAdd
class	WeakExternalStandalone

Uses of CrossReference in adams.flow.transformer

Classes in adams.flow.transformer that implement CrossReference

Modifier and Type	Class	Description
class	AppendName	Appends the suffix to the file/directory being passed through. By default, the appropriate separator (forward slash or backslash) gets inserted between the file/directory and suffix.
class	ArrayToCollection	Turns an array into a collection.
class	ArrayToSequence	Turns an array of any type into a sequence of tokens.
class	BaseName	Extracts the name of the file/directory passing through, i.e., any preceding directory gets stripped.
class	CollectionInsert	Inserts an object in the collection using the specified position. The object can be retrieved from a callable actor or from storage. If the collection does not implement the java.util.List interface and the insertion is not at the end, the insertion will fail. See also: adams.flow.transformer.StorageCollectionInsert Input/output: - accepts: java.util.Collection - generates: java.util.Collection
class	CollectionToArray	Turns a collection of any type into an array.
class	DirName	Extracts the directory part of the file/directory passing through, i.e., any trailing name part gets stripped. See also: adams.flow.transformer.AppendName adams.flow.transformer.PrependDir adams.flow.transformer.RelativeDir adams.flow.transformer.BaseName adams.flow.transformer.FileExtension Input/output: - accepts: java.lang.String java.lang.String[] java.io.File java.io.File[] - generates: java.lang.String java.lang.String[] java.io.File java.io.File[]
class	FileExtension	Extracts the file extension from the file (the part after the '.'). If no dot is in the file name, then an empty string gets forwarded. See also: adams.flow.transformer.AppendName adams.flow.transformer.PrependDir adams.flow.transformer.RelativeDir adams.flow.transformer.DirName adams.flow.transformer.BaseName Input/output: - accepts: java.lang.String java.lang.String[] java.io.File java.io.File[] - generates: java.lang.String java.lang.String[]
class	FilenameGenerator	Passes the incoming token through the generator to generate and forward a filename. See also: adams.flow.source.FilenameGenerator Input/output: - accepts: adams.flow.core.Unknown - generates: java.lang.String
class	GenerateFileBasedDataset	Applies the specified generator to the incoming dataset container. See also: adams.flow.control.SetContainerValue adams.flow.transformer.PrepareFileBasedDataset Input/output: - accepts: adams.flow.container.FileBasedDatasetContainer - generates: java.lang.String Container information: - adams.flow.container.FileBasedDatasetContainer: Train, Test, Validation, Negative
class	HashSetAdd	Adds a value to the specified hashset.
class	HashSetInit	Creates a hashset from a column in a spreadsheet or an array.
class	MergeReportFromMap	Merges the passing through report handler/report objects with the referenced map of report objects in storage.
class	ObjectArrayToPrimitiveArray	Turns an object array into an primitive one.
class	PDFAppendDocument	Modifies the incoming PDF document generated by adams.flow.source.PDFNewDocument using the PDF processors on either the specified input file or storage item. Needs to be finalized with adams.flow.sink.PDFCloseDocument. If a file name is received as input, it is assumed that this is an existing PDF file and gets appended. See also: adams.flow.source.PDFNewDocument adams.flow.sink.PDFCloseDocument Input/output: - accepts: adams.flow.transformer.pdfproclet.PDFGenerator java.lang.String java.io.File - generates: adams.flow.transformer.pdfproclet.PDFGenerator
class	PrepareFileBasedDataset	Processes the incoming files and generates a dataset container. See also: adams.flow.control.SetContainerValue adams.flow.transformer.GenerateFileBasedDataset Input/output: - accepts: java.lang.String[] - generates: adams.flow.container.FileBasedDatasetContainer Container information: - adams.flow.container.FileBasedDatasetContainer: Train, Test, Validation, Negative
class	PrependDir	Prepends the prefix to the file/directory being passed through. By default, the appropriate separator (forward slash or backslash) gets inserted between the file/directory and prefix.
class	PrimitiveArrayToObjectArray	Turns a primitive array into an object one.
class	RelativeDir	Removes the prefix from the file/directory being passed through to turn them into relative ones. See also: adams.flow.transformer.BaseName adams.flow.transformer.DirName adams.flow.transformer.AppendName adams.flow.transformer.PrependDir adams.flow.transformer.FileExtension Input/output: - accepts: java.lang.String java.lang.String[] java.io.File java.io.File[] - generates: java.lang.String java.lang.String[] java.io.File java.io.File[]
class	SequenceToArray	Turns a sequence of tokens into arrays with a specified length. In case of unspecified length (ie -1), an array containing all elements collected so far is output each time a token arrives, i.e., the internal buffer never gets reset.
class	SpreadSheetMerge	Merges two or more spreadsheets.
class	StorageCollectionInsert	Inserts the object passing through to the collection in storage at the specified position. After inserting the object successfully, just forwards the object. If the collection does not implement the java.util.List interface and the insertion is not at the end, the insertion will fail. See also: adams.flow.transformer.CollectionInsert Input/output: - accepts: adams.flow.core.Unknown - generates: adams.flow.core.Unknown
class	TextRenderer	Turns incoming objects into their textual representation, either automatic detection based on their data type or by explicitly specifying a renderer.
class	WekaClustererPostProcessor	Applies the specified post-processor to the cluster container (adams.flow.container.WekaModelContainer) See also: adams.flow.transformer.WekaTrainClusterer Input/output: - accepts: adams.flow.container.WekaModelContainer - generates: adams.flow.container.WekaModelContainer Container information: - adams.flow.container.WekaModelContainer: Model, Header, Dataset
class	WekaInstancesMerge	Merges multiple datasets, either from file or using Instances/Instance objects. If no 'ID' attribute is named, then all datasets must contain the same number of rows. Attributes can be excluded from ending up in the final dataset via a regular expression.
class	WekaPredictionsToSpreadSheet	Generates a SpreadSheet object from the predictions of an Evaluation object. See also: adams.flow.transformer.WekaSpreadSheetToPredictions Input/output: - accepts: weka.classifiers.Evaluation adams.flow.container.WekaEvaluationContainer - generates: adams.data.spreadsheet.SpreadSheet Container information: - adams.flow.container.WekaEvaluationContainer: Evaluation, Model, Prediction output, Original indices
class	WekaSpreadSheetToPredictions	Turns the predictions stored in the incoming spreadsheet (actual and predicted) into a Weka weka.classifiers.Evaluation object. For recreating the predictions of a nominal class, the class distributions must be present in the spreadsheet as well. See also: adams.flow.transformer.WekaPredictionsToSpreadSheet Input/output: - accepts: adams.data.spreadsheet.SpreadSheet - generates: weka.classifiers.Evaluation

Uses of CrossReference in adams.scripting.command.basic

Classes in adams.scripting.command.basic that implement CrossReference

Modifier and Type	Class	Description
class	Kill	Kills the remote ADAMS instance.
class	Restart	Attempts to restart the remote ADAMS instance.
class	Stop	Attempts to stop the remote ADAMS instance.