Uses of Class
adams.data.spectrum.Spectrum
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Uses of Spectrum in adams.data.cleaner.spectrum
Methods in adams.data.cleaner.spectrum that return Spectrum Modifier and Type Method Description protected SpectrumAbstractCleaner. preFilter(Spectrum data)Performs the filtering.Methods in adams.data.cleaner.spectrum with parameters of type Spectrum Modifier and Type Method Description StringAbstractCleaner. check(Spectrum data)Performs the check.protected StringInterPercentileRangeCleaner. checkSpectrum(Spectrum data)Checks the spectrum, whether all of its values (amplitudes + fields) are within the boundaries.protected abstract StringAbstractCleaner. performCheck(Spectrum data)Performs the actual check.protected StringInterPercentileRangeCleaner. performCheck(Spectrum data)Performs the check.protected StringMinMax. performCheck(Spectrum data)Performs the actual check.protected StringPassThrough. performCheck(Spectrum data)Performs the actual check.protected voidAbstractCleaner. preCheck(Spectrum data)Performs the some pre-checks whether the data is actually suitable.protected voidAbstractSerializableCleaner. preCheck(Spectrum data)Performs the some pre-checks whether the data is actually suitable.protected SpectrumAbstractCleaner. preFilter(Spectrum data)Performs the filtering. -
Uses of Spectrum in adams.data.compare
Methods in adams.data.compare with parameters of type Spectrum Modifier and Type Method Description protected BooleanSpectrumCorrelation. doCompareObjects(Spectrum o1, Spectrum o2)Performs the actual comparison of the two objects.protected BooleanSpectrumCosineSimilarity. doCompareObjects(Spectrum o1, Spectrum o2)Performs the actual comparison of the two objects. -
Uses of Spectrum in adams.data.instances
Methods in adams.data.instances with parameters of type Spectrum Modifier and Type Method Description protected voidAbstractFieldInstanceGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidAbstractFieldInstanceGeneratorWithClass. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidAbstractSpectrumInstanceGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidAbstractSpectrumInstanceGeneratorWithClass. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidSimpleInstanceGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidSimpleSpectralInstanceGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidAbstractSpectrumBasedInstanceGenerator. checkInput(Spectrum data)Checks the input spectrum.protected abstract voidAbstractSpectrumInstanceGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected abstract voidAbstractSpectrumInstanceGeneratorWithClass. generateHeader(Spectrum data)Generates the header of the output data.protected voidFieldInstanceGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected voidFieldInstanceGeneratorWithClass. generateHeader(Spectrum data)Generates the header of the output data.protected voidSimpleInstanceGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected voidSimpleSpectralInstanceGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected weka.core.InstanceFieldInstanceGenerator. generateOutput(Spectrum data)Generates the actual data.protected weka.core.InstanceFieldInstanceGeneratorWithClass. generateOutput(Spectrum data)Generates the actual data.protected weka.core.InstanceSimpleInstanceGenerator. generateOutput(Spectrum data)Generates the actual data.protected weka.core.InstanceSimpleSpectralInstanceGenerator. generateOutput(Spectrum data)Generates the actual data.protected voidAbstractSpectrumBasedInstanceGenerator. postProcessHeader(Spectrum data)Adds IDs, notes, additional fields to header.protected voidAbstractSpectrumInstanceGenerator. postProcessHeader(Spectrum data)Adds IDs, notes, additional fields to header.protected weka.core.InstanceAbstractSpectrumBasedInstanceGenerator. postProcessOutput(Spectrum data, weka.core.Instance inst)Adds the IDs, notes, additional fields to the data.protected weka.core.InstanceAbstractSpectrumInstanceGenerator. postProcessOutput(Spectrum data, weka.core.Instance inst)Adds the IDs, notes, additional fields to the data. -
Uses of Spectrum in adams.data.io.input
Fields in adams.data.io.input declared as Spectrum Modifier and Type Field Description protected SpectrumSPCSpectrumReader.SubFileParser. m_Spectrumthe parsed spectrum.Fields in adams.data.io.input with type parameters of type Spectrum Modifier and Type Field Description protected List<Spectrum>SPCSpectrumReader.FileParser. m_Spectrathe parsed spectrum.Methods in adams.data.io.input that return Spectrum Modifier and Type Method Description SpectrumSPCSpectrumReader.SubFileParser. getSpectrum()Returns the parsed spectrum.protected SpectrumSoilCaresScannerSpectrumReader. readSpectrum(ZipFile zip, ZipEntry entry)Reads the spectrum from the specified zip entry.Methods in adams.data.io.input that return types with arguments of type Spectrum Modifier and Type Method Description List<Spectrum>SPCSpectrumReader.FileParser. getSpectra()Returns the parsed spectra.Methods in adams.data.io.input with parameters of type Spectrum Modifier and Type Method Description protected adams.data.report.ReportAbstractSpectrumReader. createDummyReport(Spectrum cont)Creates a dummy report. -
Uses of Spectrum in adams.data.io.input.sampleidextraction
Methods in adams.data.io.input.sampleidextraction with parameters of type Spectrum Modifier and Type Method Description protected voidAbstractSampleIDExtraction. check(File file, Spectrum spec)Performs checks before the actual extraction.protected abstract StringAbstractSampleIDExtraction. doExtract(File file, Spectrum spec)Performs the actual extraction.protected StringFilename. doExtract(File file, Spectrum spec)Performs the actual extraction.protected StringRegExp. doExtract(File file, Spectrum spec)Performs the actual extraction.StringAbstractSampleIDExtraction. extract(File file, Spectrum spec)Performs the extraction.StringSampleIDExtraction. extract(File file, Spectrum spec)Performs the extraction. -
Uses of Spectrum in adams.data.io.output
Methods in adams.data.io.output with parameters of type Spectrum Modifier and Type Method Description protected StringASCSpectrumWriter. genASCString(Spectrum data)Generate the ASC String to output.protected byte[]NIRSpectrumWriter. genByteArray(Spectrum data)Generate the byte array that makes up the .nir file.FossOutputHelper.ConstituentValuesCALSpectrumWriter. getConstituentValues(Spectrum sp)Create ConstituentValues for a spectrum.FossOutputHelper.ConstituentValuesNIRSpectrumWriter. getConstituentValues(Spectrum sp)Create ConstituentValues for a spectrum.FossOutputHelper.DataBlockNIRSpectrumWriter. getDataBlock(Spectrum sp)Create a DataBlock from a spectrum.FossOutputHelper.SampleHeaderNIRSpectrumWriter. getSampleHeader(Spectrum sp, int pos)Create a SampleHeader from a Spectrum and position in list/file.FossOutputHelper.SampleInfoNIRSpectrumWriter. getSampleInfo(Spectrum sp, int pos)Create a SampleInfo for the file footer based on a Spectrum and it's position in list/file.Method parameters in adams.data.io.output with type arguments of type Spectrum Modifier and Type Method Description protected voidASCSpectrumWriter. checkData(List<Spectrum> data)Writer can only write single spectra.protected voidDPTSpectrumWriter. checkData(List<Spectrum> data)Writer can only write single chromatograms.protected voidFilteredSpectrumWriter. checkData(List<Spectrum> data)Performs checks on the data.protected voidJCampDX2SpectrumWriter. checkData(List<Spectrum> data)Writer can only write single chromatograms.protected byte[]NIRSpectrumWriter. genByteArray(List<Spectrum> datalist)Generate the byte array that makes up the .nir file.FossOutputHelper.GeneralheaderCALSpectrumWriter. getGeneralHeader(List<Spectrum> data)Create GeneralHeader from list of Spectra.FossOutputHelper.GeneralheaderNIRSpectrumWriter. getGeneralHeader(List<Spectrum> data)Create GeneralHeader from list of Spectra.protected booleanASCIIXYSpectrumWriter. write(List<Spectrum> data, BufferedWriter writer, boolean report)Writes its content with the given writer.protected booleanASCIIXYSpectrumWriter. write(List<Spectrum> data, String filename, boolean report)Writes its content to the given file.protected booleanSimpleSpectrumWriter. write(List<Spectrum> data, BufferedWriter writer, boolean report)Writes its content with the given writer.protected booleanSimpleSpectrumWriter. write(List<Spectrum> data, String filename, boolean report)Writes its content to the given file.protected booleanASCIIXYSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanASCSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanDPTSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanFilteredSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanJCampDX2SpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanJsonSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanNIRSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanSimpleSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanSpectrumImageWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanSpreadSheetSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing.protected booleanTrinamixSpectrumWriter. writeData(List<Spectrum> data)Performs the actual writing. -
Uses of Spectrum in adams.data.io.output.foss
Fields in adams.data.io.output.foss declared as Spectrum Modifier and Type Field Description SpectrumFossOutputHelper.DataBlock. m_SpectrumThe Spectrum. -
Uses of Spectrum in adams.data.multifilter
Methods in adams.data.multifilter that return Spectrum Modifier and Type Method Description SpectrumAbstractMultiSpectrumFilter. filter(MultiSpectrum data)Returns the filtered data.protected SpectrumAbstractBinaryFormatsBasedMultiSpectrumFilter. processData(MultiSpectrum data)Performs the actual filtering.protected abstract SpectrumAbstractBinaryFormatsBasedMultiSpectrumFilter. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected abstract SpectrumAbstractMultiSpectrumFilter. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumAdd. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumAtan2. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumAverage. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumDivide. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumFilteredMultiSpectrumFilter. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumFusion. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumMean. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumMedian. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumMultiply. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumPickByIndex. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumPickByReportValue. processData(MultiSpectrum data)Performs the actual filtering.protected SpectrumSubtract. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.Method parameters in adams.data.multifilter with type arguments of type Spectrum Modifier and Type Method Description protected abstract SpectrumAbstractBinaryFormatsBasedMultiSpectrumFilter. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumAdd. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumAtan2. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumDivide. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumMultiply. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra.protected SpectrumSubtract. processData(MultiSpectrum data, List<Spectrum> spectra)Performs the actual filtering of the selected spectra. -
Uses of Spectrum in adams.data.sampledata
Methods in adams.data.sampledata that return Spectrum Modifier and Type Method Description protected SpectrumSignalToNoiseRatio. processData(Spectrum data)Methods in adams.data.sampledata with parameters of type Spectrum Modifier and Type Method Description protected doubleSignalToNoiseRatio. Noise_bySmoothing(Spectrum data)Return the RMSE noise value, as a distance from the smoothed spectrumprotected SpectrumSignalToNoiseRatio. processData(Spectrum data)protected doubleSignalToNoiseRatio. SNR_byParabolicRegression(Spectrum data)Return the SNR measured from quadratic approximationprotected doubleSignalToNoiseRatio. SNR_bySmoothing(Spectrum data)Return the SNR measured from smoothed spectrum -
Uses of Spectrum in adams.data.spectrum
Fields in adams.data.spectrum with type parameters of type Spectrum Modifier and Type Field Description protected static adams.data.container.DataPointComparator<Spectrum>MultiSpectrum. m_Comparatorthe default comparator.Methods in adams.data.spectrum that return Spectrum Modifier and Type Method Description static SpectrumSpectrumUtils. fillGaps(Spectrum gaps, Spectrum reference, adams.data.container.DataContainerUtils.GapFilling type)Fills the gaps in the "gaps" spectrum with the data from the "reference" spectrum and the type of gap-filling.static SpectrumSpectrumJsonUtils. fromJson(com.google.gson.JsonObject jobj)Creates a spectrum from the JSON object (spectral + report).static SpectrumSpectrumUtils. getConsecutiveRegion(List<SpectrumPoint> points, SpectrumPoint lastEnd, SpectrumPoint end)Returns a region for the given range, starting just after the wave number of "lastEnd" and ending (including) at "end".SpectrumSpectrum. getHeader()Returns a spectrum with just the header information, but no spectrum points.protected static SpectrumSpectrumUtils. getHeader(List<SpectrumPoint> points)Creates a header based on the given spectrum points.static SpectrumSpectrumUtils. getRegion(List<SpectrumPoint> points, SpectrumPoint start, SpectrumPoint end)Returns a region for the given range, including both, start and end point.static SpectrumSpectrumUtils. intersect(Spectrum a, Spectrum b)Returns a spectrum that contains all the points that are in "a" and in "b".static SpectrumSpectrumUtils. merge(Spectrum s1, Spectrum s2)Merges the two spectrums.static SpectrumSpectrumUtils. merge(List<Spectrum> list)Merges the given spectrums.static SpectrumSpectrumUtils. minus(Spectrum a, Spectrum b)Returns a spectrum that contains all the points that are in "a" but not in "b".SpectrumMultiSpectrum. newPoint()Returns a new instance of a DataContainer point.static SpectrumSpectrumUtils. pad(Spectrum data, int numPoints, boolean padLeft, float waveStepSize, float amplitude)Pads the spectrum either on left or right to have at least the specified number of points.static SpectrumSpectrumUtils. union(Spectrum a, Spectrum b)Returns the union of the two spectrums "a" and "b".Methods in adams.data.spectrum that return types with arguments of type Spectrum Modifier and Type Method Description adams.data.container.DataPointComparator<Spectrum>MultiSpectrum. getComparator()Returns the comparator in use (custom one if defined, otherwise the default one).static List<Spectrum>SpectrumUtils. getMissingRegions(Spectrum a, Spectrum b)Returns all the regions that are in "a", but not in "b".adams.data.container.DataPointComparator<Spectrum>MultiSpectrum. newComparator()Returns a new instance of the default comparator.Methods in adams.data.spectrum with parameters of type Spectrum Modifier and Type Method Description protected static voidSpectrumUtils. add(Hashtable<Float,SpectrumPoint> pool, Spectrum s)Merges the given spectrum with the current data pool.protected voidAbstractSpectrumFeatureGenerator. checkData(Spectrum spectrum)Optional checks of the spectrum.intSpectrumComparator. compare(Spectrum o1, Spectrum o2)Compares its two arguments for order.intSpectrumComparatorByReportValue. compare(Spectrum o1, Spectrum o2)Compares its two arguments for order.abstract adams.data.featureconverter.HeaderDefinitionAbstractSpectrumFeatureGenerator. createHeader(Spectrum spectrum)Creates the header from a template spectrum.adams.data.featureconverter.HeaderDefinitionAmplitudes. createHeader(Spectrum spectrum)Creates the header from a template spectrum.static StringSpectrumUtils. diff(Spectrum s1, Spectrum s2, Spectrum diff, boolean absolute)Computes the difference between two spectra.static SpectrumSpectrumUtils. fillGaps(Spectrum gaps, Spectrum reference, adams.data.container.DataContainerUtils.GapFilling type)Fills the gaps in the "gaps" spectrum with the data from the "reference" spectrum and the type of gap-filling.Object[]AbstractSpectrumFeatureGenerator. generate(Spectrum spectrum)Process the given spectrum.abstract List<Object>[]AbstractSpectrumFeatureGenerator. generateRows(Spectrum spectrum)Performs the actual feature genration.List<Object>[]Amplitudes. generateRows(Spectrum spectrum)Performs the actual feature genration.static List<Spectrum>SpectrumUtils. getMissingRegions(Spectrum a, Spectrum b)Returns all the regions that are in "a", but not in "b".static SpectrumSpectrumUtils. intersect(Spectrum a, Spectrum b)Returns a spectrum that contains all the points that are in "a" and in "b".static SpectrumSpectrumUtils. merge(Spectrum s1, Spectrum s2)Merges the two spectrums.static SpectrumSpectrumUtils. minus(Spectrum a, Spectrum b)Returns a spectrum that contains all the points that are in "a" but not in "b".static SpectrumSpectrumUtils. pad(Spectrum data, int numPoints, boolean padLeft, float waveStepSize, float amplitude)Pads the spectrum either on left or right to have at least the specified number of points.List<Object>AbstractSpectrumFeatureGenerator. postProcessRow(Spectrum spectrum, List<Object> data)Post-processes the generated row, adding notes and fields.List<Object>[]AbstractSpectrumFeatureGenerator. postProcessRows(Spectrum spectrum, List<Object>[] data)Post-processes the generated rows, adding notes and fields.static double[]SpectrumUtils. toDoubleArray(Spectrum c)Returns the amplitudes as double array.static com.google.gson.JsonObjectSpectrumJsonUtils. toJson(Spectrum spec)Turns the spectrum into a json structure (spectral + report).static com.google.gson.JsonObjectSpectrumJsonUtils. toJson(Spectrum spec, adams.data.report.Field[] ref, adams.data.report.Field[] meta)Turns the spectrum into a json structure (spectral + ref + meta).static SpectrumSpectrumUtils. union(Spectrum a, Spectrum b)Returns the union of the two spectrums "a" and "b".Method parameters in adams.data.spectrum with type arguments of type Spectrum Modifier and Type Method Description voidMultiSpectrum. assign(adams.data.container.DataContainer<Spectrum> other)Obtains the stored variables from the other data point, but not the actual data points.static SpectrumSpectrumUtils. merge(List<Spectrum> list)Merges the given spectrums. -
Uses of Spectrum in adams.data.spectrumanalysis
Method parameters in adams.data.spectrumanalysis with type arguments of type Spectrum Modifier and Type Method Description protected voidAbstractSpectrumAnalysis. check(List<Spectrum> data)Hook method for checks.protected StringAbstractWekaSpectrumAnalysis. doAnalyze(List<Spectrum> data)Performs the actual analysis. -
Uses of Spectrum in adams.data.spectrumbaseline
Methods in adams.data.spectrumbaseline that return Spectrum Modifier and Type Method Description protected SpectrumLinearRegressionBased. correctData(Spectrum data, double[] coeff)Corrects the data with the given coefficients.protected SpectrumLinearRegressionBased. generateLine(Spectrum data, double[] coeff)Generates fake data for the plotting the line.Methods in adams.data.spectrumbaseline with parameters of type Spectrum Modifier and Type Method Description protected SpectrumLinearRegressionBased. correctData(Spectrum data, double[] coeff)Corrects the data with the given coefficients.protected SpectrumLinearRegressionBased. generateLine(Spectrum data, double[] coeff)Generates fake data for the plotting the line.protected weka.core.InstancesLinearRegressionBased. getInstances(Spectrum data)Returns the dataset for linear regression.protected adams.data.container.DataPointSavitzkyGolayBased. getOriginalPoint(adams.data.container.DataPoint newPoint, Spectrum original)Retrieves the data point from the original signal that corresponds to the provided new one. -
Uses of Spectrum in adams.data.spectrumfilter
Fields in adams.data.spectrumfilter declared as Spectrum Modifier and Type Field Description protected SpectrumMultiplicativeScatterCorrection. m_Averagethe average spectrum.Fields in adams.data.spectrumfilter with type parameters of type Spectrum Modifier and Type Field Description protected adams.data.filter.Filter<Spectrum>Covariance. m_filterfilter to apply to retrieved spectra.protected adams.data.filter.Filter<Spectrum>SubtractSpectrum. m_Filterthe filter to run.protected adams.data.filter.Filter<Spectrum>MultiplicativeScatterCorrection. m_PreFilterthe filter to apply to the spectra internally.Methods in adams.data.spectrumfilter that return Spectrum Modifier and Type Method Description Spectrum[]MultiplicativeScatterCorrection. batchFilter(Spectrum[] data)Batch filters the data.protected Spectrum[]PCA. processBatchData(Spectrum[] data)Performs the actual batch filtering.protected Spectrum[]PLS. processBatchData(Spectrum[] data)Performs the actual batch filtering.protected SpectrumAmplitudeExpression. processData(Spectrum data)Performs the actual filtering.protected SpectrumAmplitudeTransform. processData(Spectrum data)Performs the actual filtering.protected SpectrumAndrewsCurves. processData(Spectrum data)Performs the actual filtering.protected SpectrumCenterBurst. processData(Spectrum data)Performs the actual filtering.protected SpectrumChangeFormat. processData(Spectrum data)Performs the actual filtering.protected SpectrumConditionalReportField. processData(Spectrum data)Performs the actual filtering.protected SpectrumCovariance. processData(Spectrum data)Performs the actual filtering.protected SpectrumDetrend. processData(Spectrum data)Performs the actual filtering.protected SpectrumEquiDistance. processData(Spectrum data)Performs the actual filtering.protected SpectrumLogTransform. processData(Spectrum data)Performs the actual filtering.protected SpectrumLRCoeff. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiFilter. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiplicativeScatterCorrection. processData(Spectrum data)Performs the actual filtering.protected SpectrumPadPower2. processData(Spectrum data)Performs the actual filtering.protected SpectrumPCA. processData(Spectrum data)Does nothing.protected SpectrumPLS. processData(Spectrum data)Does nothing.protected SpectrumRebase. processData(Spectrum data)Performs the actual filtering.protected SpectrumRemove. processData(Spectrum data)Performs the actual filtering.protected SpectrumReportFieldFromStringValue. processData(Spectrum data)Performs the actual filtering.protected SpectrumReportFieldFromStringValueWithLookup. processData(Spectrum data)Performs the actual filtering.protected SpectrumReverse. processData(Spectrum data)Performs the actual filtering.protected SpectrumRowNorm. processData(Spectrum data)Performs the actual filtering.protected SpectrumRowZeroMin. processData(Spectrum data)Performs the actual filtering.protected SpectrumScale. processData(Spectrum data)Performs the actual filtering.protected SpectrumStandardiseByInterpolation. processData(Spectrum data)Performs the actual filtering.protected SpectrumSubRange. processData(Spectrum data)Performs the actual filtering.protected SpectrumSubtractSpectrum. processData(Spectrum data)Performs the actual filtering.protected SpectrumWaveNumberExpression. processData(Spectrum data)Performs the actual filtering.protected SpectrumWekaFilterToReport. processData(Spectrum data)Performs the actual filtering.protected SpectrumZeroCenterBurst. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiFilter. processDataParallel(Spectrum data)Performs the actual filtering - parallel application of filters and merging of results.Methods in adams.data.spectrumfilter that return types with arguments of type Spectrum Modifier and Type Method Description adams.data.filter.Filter<Spectrum>Covariance. getFilter()Get filter.adams.data.filter.Filter<Spectrum>MultiplicativeScatterCorrection. getPreFilter()Returns the prefilter to use.Methods in adams.data.spectrumfilter with parameters of type Spectrum Modifier and Type Method Description Spectrum[]MultiplicativeScatterCorrection. batchFilter(Spectrum[] data)Batch filters the data.protected doubleKennardStone. calculateDistance(Spectrum spec1, Spectrum spec2)Calculate the distance between any two spectra.protected voidAbstractSerializableFilter. checkData(Spectrum data)Loads the serialized data on demand in addition to the checks.protected voidLRCoeff. checkData(Spectrum data)The default implementation only checks whether there is any data set.protected voidMultiplicativeScatterCorrection. checkData(Spectrum data)The default implementation only checks whether there is any data set.protected doubleSAX. getMeanDeltaX(Spectrum data)Computes the mean difference between data points on the X axis.protected Spectrum[]PCA. processBatchData(Spectrum[] data)Performs the actual batch filtering.protected Spectrum[]PLS. processBatchData(Spectrum[] data)Performs the actual batch filtering.protected SpectrumAmplitudeExpression. processData(Spectrum data)Performs the actual filtering.protected SpectrumAmplitudeTransform. processData(Spectrum data)Performs the actual filtering.protected SpectrumAndrewsCurves. processData(Spectrum data)Performs the actual filtering.protected SpectrumCenterBurst. processData(Spectrum data)Performs the actual filtering.protected SpectrumChangeFormat. processData(Spectrum data)Performs the actual filtering.protected SpectrumConditionalReportField. processData(Spectrum data)Performs the actual filtering.protected SpectrumCovariance. processData(Spectrum data)Performs the actual filtering.protected SpectrumDetrend. processData(Spectrum data)Performs the actual filtering.protected SpectrumEquiDistance. processData(Spectrum data)Performs the actual filtering.protected SpectrumLogTransform. processData(Spectrum data)Performs the actual filtering.protected SpectrumLRCoeff. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiFilter. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiplicativeScatterCorrection. processData(Spectrum data)Performs the actual filtering.protected SpectrumPadPower2. processData(Spectrum data)Performs the actual filtering.protected SpectrumPCA. processData(Spectrum data)Does nothing.protected SpectrumPLS. processData(Spectrum data)Does nothing.protected SpectrumRebase. processData(Spectrum data)Performs the actual filtering.protected SpectrumRemove. processData(Spectrum data)Performs the actual filtering.protected SpectrumReportFieldFromStringValue. processData(Spectrum data)Performs the actual filtering.protected SpectrumReportFieldFromStringValueWithLookup. processData(Spectrum data)Performs the actual filtering.protected SpectrumReverse. processData(Spectrum data)Performs the actual filtering.protected SpectrumRowNorm. processData(Spectrum data)Performs the actual filtering.protected SpectrumRowZeroMin. processData(Spectrum data)Performs the actual filtering.protected SpectrumScale. processData(Spectrum data)Performs the actual filtering.protected SpectrumStandardiseByInterpolation. processData(Spectrum data)Performs the actual filtering.protected SpectrumSubRange. processData(Spectrum data)Performs the actual filtering.protected SpectrumSubtractSpectrum. processData(Spectrum data)Performs the actual filtering.protected SpectrumWaveNumberExpression. processData(Spectrum data)Performs the actual filtering.protected SpectrumWekaFilterToReport. processData(Spectrum data)Performs the actual filtering.protected SpectrumZeroCenterBurst. processData(Spectrum data)Performs the actual filtering.protected SpectrumMultiFilter. processDataParallel(Spectrum data)Performs the actual filtering - parallel application of filters and merging of results.voidMultiplicativeScatterCorrection. trainFilter(Spectrum[] data)Trains the filter with the specified data.Method parameters in adams.data.spectrumfilter with type arguments of type Spectrum Modifier and Type Method Description voidCovariance. setFilter(adams.data.filter.Filter<Spectrum> filter)Set filter.voidMultiplicativeScatterCorrection. setPreFilter(adams.data.filter.Filter<Spectrum> value)Sets the prefilter to use. -
Uses of Spectrum in adams.data.spectrumfilter.amplitudetransform
Methods in adams.data.spectrumfilter.amplitudetransform that return Spectrum Modifier and Type Method Description SpectrumAbstractAmplitudeTransformer. transform(Spectrum data)Transforms the spectrum.Methods in adams.data.spectrumfilter.amplitudetransform with parameters of type Spectrum Modifier and Type Method Description protected voidAbstractAmplitudeTransformer. initialize(Spectrum data)Hook method for initializing the transformer.protected voidApplyMultiplicativeScatterCorrection. initialize(Spectrum data)Hook method for initializing the transformer.SpectrumAbstractAmplitudeTransformer. transform(Spectrum data)Transforms the spectrum. -
Uses of Spectrum in adams.data.spectrumfilter.detrend
Methods in adams.data.spectrumfilter.detrend that return Spectrum Modifier and Type Method Description abstract SpectrumAbstractDetrend. correct(Spectrum data)Corrects the spectrum.SpectrumMean. correct(Spectrum data)Corrects the spectrum.SpectrumRangeBased. correct(Spectrum data)Corrects the spectrum.Methods in adams.data.spectrumfilter.detrend with parameters of type Spectrum Modifier and Type Method Description abstract SpectrumAbstractDetrend. correct(Spectrum data)Corrects the spectrum.SpectrumMean. correct(Spectrum data)Corrects the spectrum.SpectrumRangeBased. correct(Spectrum data)Corrects the spectrum. -
Uses of Spectrum in adams.data.spectrumfilter.multiplicativescattercorrection
Fields in adams.data.spectrumfilter.multiplicativescattercorrection with type parameters of type Spectrum Modifier and Type Field Description protected adams.data.filter.Filter<Spectrum>AbstractMultiplicativeScatterCorrection. m_PreFilterthe filter to apply to the spectra internally.Methods in adams.data.spectrumfilter.multiplicativescattercorrection that return Spectrum Modifier and Type Method Description abstract SpectrumAbstractMultiplicativeScatterCorrection. correct(Spectrum average, Spectrum data)Corrects the spectrum.SpectrumRangeBased. correct(Spectrum average, Spectrum data)Corrects the spectrum.Methods in adams.data.spectrumfilter.multiplicativescattercorrection that return types with arguments of type Spectrum Modifier and Type Method Description adams.data.filter.Filter<Spectrum>AbstractMultiplicativeScatterCorrection. getPreFilter()Returns the prefilter to use.Methods in adams.data.spectrumfilter.multiplicativescattercorrection with parameters of type Spectrum Modifier and Type Method Description abstract SpectrumAbstractMultiplicativeScatterCorrection. correct(Spectrum average, Spectrum data)Corrects the spectrum.SpectrumRangeBased. correct(Spectrum average, Spectrum data)Corrects the spectrum.Method parameters in adams.data.spectrumfilter.multiplicativescattercorrection with type arguments of type Spectrum Modifier and Type Method Description voidAbstractMultiplicativeScatterCorrection. setPreFilter(adams.data.filter.Filter<Spectrum> value)Sets the prefilter to use. -
Uses of Spectrum in adams.data.spectrumimage
Methods in adams.data.spectrumimage with parameters of type Spectrum Modifier and Type Method Description protected StringAbstractSpectrumImageGenerator. check(Spectrum spectrum)Hook method for checks before generating the image.protected StringAbstractSpectrumImageGeneratorWithRange. check(Spectrum spectrum)Hook method for checks before generating the image.protected StringSpectrogram. check(Spectrum spectrum)Hook method for checks before generating the image.protected abstract BufferedImageAbstractSpectrumImageGenerator. doGenerate(Spectrum spectrum)Converts the spectrum into an image.protected BufferedImageAmplitudeRatio. doGenerate(Spectrum spectrum)Converts the spectrum into an image.protected BufferedImageIntensity. doGenerate(Spectrum spectrum)Converts the spectrum into an image.protected BufferedImageSpectrogram. doGenerate(Spectrum spectrum)Converts the spectrum into an image.BufferedImageAbstractSpectrumImageGenerator. generate(Spectrum spectrum)Converts the spectrum into an image. -
Uses of Spectrum in adams.data.spectrumoutlier
Methods in adams.data.spectrumoutlier with parameters of type Spectrum Modifier and Type Method Description protected List<String>AmplitudeRange. processData(Spectrum data)Performs the actual detection.protected List<String>Flatliner. processData(Spectrum data)Performs the actual detection.protected List<String>MaxWaves. processData(Spectrum data)Performs the actual detection.protected List<String>MinWaves. processData(Spectrum data)Performs the actual detection.protected List<String>Oscillation. processData(Spectrum data)Performs the actual detection.protected List<String>Swapped. processData(Spectrum data)Performs the actual detection.voidAmplitudeRange. trainDetector(Spectrum[] data)Trains the detector with the specified data. -
Uses of Spectrum in adams.data.spreadsheetrowgenerator
Methods in adams.data.spreadsheetrowgenerator with parameters of type Spectrum Modifier and Type Method Description protected abstract voidAbstractSpreadSheetRowGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidSampleDataOnlyRowGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidSimpleRowGenerator. checkHeader(Spectrum data)Checks whether the number of waves are the same.protected voidAbstractSpreadSheetRowGenerator. checkInput(Spectrum data)Checks the input spectrum.adams.data.spreadsheet.RowAbstractSpreadSheetRowGenerator. generate(Spectrum data)Returns the generated data, generates it if necessary.protected abstract voidAbstractSpreadSheetRowGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected voidSampleDataOnlyRowGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected voidSimpleRowGenerator. generateHeader(Spectrum data)Generates the header of the output data.protected abstract adams.data.spreadsheet.RowAbstractSpreadSheetRowGenerator. generateOutput(Spectrum data)Generates the actual data.protected adams.data.spreadsheet.RowSampleDataOnlyRowGenerator. generateOutput(Spectrum data)Generates the actual data.protected adams.data.spreadsheet.RowSimpleRowGenerator. generateOutput(Spectrum data)Generates the actual data.protected voidAbstractSpreadSheetRowGenerator. postProcessHeader(Spectrum data)Adds IDs, notes, additional fields to header.protected adams.data.spreadsheet.RowAbstractSpreadSheetRowGenerator. postProcessOutput(Spectrum data, adams.data.spreadsheet.Row row)For adding IDs, notes, additional fields to the data. -
Uses of Spectrum in adams.data.statistics
Methods in adams.data.statistics that return Spectrum Modifier and Type Method Description SpectrumSpectrumStatistic. getData()Returns the currently stored spectrum.Methods in adams.data.statistics with parameters of type Spectrum Modifier and Type Method Description voidSpectrumStatistic. setData(Spectrum value)Sets the data to use as basis for the calculations.Constructors in adams.data.statistics with parameters of type Spectrum Constructor Description SpectrumStatistic(Spectrum data)Initializes the statistic. -
Uses of Spectrum in adams.db
Methods in adams.db that return Spectrum Modifier and Type Method Description SpectrumSpectrumF. load(int auto_id)Load a spectrum with given database ID.SpectrumSpectrumF. load(String id)Load a spectrum with given ID.SpectrumSpectrumF. load(String sample_id, String format)Load a spectrum with given sample ID and type.SpectrumSpectrumIntf. load(int auto_id)Load a spectrum with given database ID.SpectrumSpectrumIntf. load(String id)Load a spectrum with given ID.SpectrumSpectrumIntf. load(String sample_id, String format)Load a spectrum with given sample ID and type.SpectrumSpectrumF. loadFromDB(int auto_id, String rlike, boolean raw)Load a spectrum from DB with given auto_id.SpectrumSpectrumF. loadFromDB(String sample_id, String format, boolean raw)Load a spectrum from DB with given sample_id and format.SpectrumSpectrumIntf. loadFromDB(int auto_id, String rlike, boolean raw)Load a spectrum from DB with given auto_id.SpectrumSpectrumIntf. loadFromDB(String sample_id, String format, boolean raw)Load a spectrum from DB with given sample_id and format.SpectrumSpectrumF. loadRaw(int auto_id)Load a data container with given auto_id, without passing it through the global filter.SpectrumSpectrumF. loadRaw(String sample_id, String format)Load a spectrum with given sample ID and type, without filtering through the global container filter.SpectrumSpectrumIntf. loadRaw(int auto_id)Load a data container with given auto_id, without passing it through the global filter.SpectrumSpectrumIntf. loadRaw(String sample_id, String format)Load a spectrum with given sample ID and type, without filtering through the global container filter.Methods in adams.db with parameters of type Spectrum Modifier and Type Method Description IntegerSpectrumF. add(Spectrum sp)Adds a spectrum to the database.IntegerSpectrumF. add(Spectrum sp, boolean storeWaveNo)Adds a spectrum to the database.IntegerSpectrumIntf. add(Spectrum sp)Adds a spectrum to the database.IntegerSpectrumIntf. add(Spectrum sp, boolean storeWaveNo)Adds a spectrum to the database.booleanSpectrumF. bulkAdd(Spectrum[] sp, boolean storeWaveNo, int batchSize, boolean autoCommit, boolean newConnection)Stores the spectra in the database.booleanSpectrumIntf. bulkAdd(Spectrum[] sp, boolean storeWaveNo, int batchSize, boolean autoCommit, boolean newConnection)Stores the spectra in the database. -
Uses of Spectrum in adams.db.generic
Methods in adams.db.generic that return Spectrum Modifier and Type Method Description SpectrumSpectrumT. load(int auto_id)Load a spectrum with given database ID.SpectrumSpectrumT. load(String id)Load a spectrum with given ID.SpectrumSpectrumT. load(String sample_id, String format)Load a spectrum with given sample ID and type.SpectrumSpectrumT. loadFromDB(int auto_id, String rlike, boolean raw)Load a spectrum from DB with given auto_id.SpectrumSpectrumT. loadFromDB(String sample_id, String format, boolean raw)Load a spectrum from DB with given sample_id and format.SpectrumSpectrumT. loadRaw(int auto_id)Load a data container with given auto_id, without passing it through the global filter.SpectrumSpectrumT. loadRaw(String sample_id, String format)Load a spectrum with given sample ID and type, without filtering through the global container filter.protected SpectrumSpectrumT. resultsetToSpectrum(ResultSet rs, boolean raw)Turns a ResultSet into a spectrum.Methods in adams.db.generic with parameters of type Spectrum Modifier and Type Method Description IntegerSpectrumT. add(Spectrum sp)Adds a spectrum to the database.IntegerSpectrumT. add(Spectrum sp, boolean storeWaveNo)Adds a spectrum to the database.protected StringBuilderSpectrumT. addQuery(Spectrum sp, boolean storeWaveNo)Generates the query string for adding a spectrum.booleanSpectrumT. bulkAdd(Spectrum[] sp, boolean storeWaveNo, int batchSize, boolean autoCommit, boolean newConnection)Stores the spectra in the database.protected StringSpectrumT. pointsToString(Spectrum sp, boolean storeWaveNo)Turns the spectrum points into a string to be stored in the database. -
Uses of Spectrum in adams.db.mirrored
Methods in adams.db.mirrored that return Spectrum Modifier and Type Method Description SpectrumSpectrumT. load(int auto_id)Load a spectrum with given database ID.SpectrumSpectrumT. load(String id)Load a spectrum with given ID.SpectrumSpectrumT. load(String sample_id, String format)Load a spectrum with given sample ID and type.SpectrumSpectrumT. loadFromDB(int auto_id, String rlike, boolean raw)Load a spectrum from DB with given auto_id.SpectrumSpectrumT. loadFromDB(String sample_id, String format, boolean raw)Load a spectrum from DB with given sample_id and format.SpectrumSpectrumT. loadRaw(int auto_id)Load a data container with given auto_id, without passing it through the global filter.SpectrumSpectrumT. loadRaw(String sample_id, String format)Load a spectrum with given sample ID and type, without filtering through the global container filter.Methods in adams.db.mirrored with parameters of type Spectrum Modifier and Type Method Description IntegerSpectrumT. add(Spectrum sp)Adds a spectrum to the database.IntegerSpectrumT. add(Spectrum sp, boolean storeWaveNo)Adds a spectrum to the database.booleanSpectrumT. bulkAdd(Spectrum[] sp, boolean storeWaveNo, int batchSize, boolean autoCommit, boolean newConnection)Stores the spectra in the database. -
Uses of Spectrum in adams.db.sqlite
Methods in adams.db.sqlite with parameters of type Spectrum Modifier and Type Method Description IntegerSpectrumT. add(Spectrum sp, boolean storeWaveNo)Adds a spectrum to the database. -
Uses of Spectrum in adams.flow.container
Constructors in adams.flow.container with parameters of type Spectrum Constructor Description SpectrumFilterContainer(Object input, adams.data.filter.Filter filter, Spectrum data)Initializes the container with the filter and the associated data. -
Uses of Spectrum in adams.flow.control
Methods in adams.flow.control that return types with arguments of type Spectrum Modifier and Type Method Description protected adams.data.io.input.AbstractDataContainerReader<Spectrum>SpectrumFileChecker. getDefaultReader()Returns the default reader for loading the data. -
Uses of Spectrum in adams.flow.core
Methods in adams.flow.core that return Spectrum Modifier and Type Method Description static SpectrumGetSpectrumHelper. webserviceToKnir(Spectrum input)Converts a Webservice spectrum into a KNIR one.static SpectrumPutSpectrumHelper. webserviceToKnir(Spectrum input)Converts a Webservice spectrum into a KNIR one.static SpectrumRatsSpectrumHelper. webserviceToKnir(Spectrum input)Converts a Webservice spectrum into a KNIR one.static SpectrumTransformSpectrumHelper. webserviceToKnir(Spectrum input)Converts a Webservice spectrum into a KNIR one.Methods in adams.flow.core with parameters of type Spectrum Modifier and Type Method Description static SpectrumGetSpectrumHelper. knirToWebservice(Spectrum input)Converts a KNIR spectrum into a Webservice one.static SpectrumPutSpectrumHelper. knirToWebservice(Spectrum input)Converts a KNIR spectrum into a Webservice one.static SpectrumRatsSpectrumHelper. knirToWebservice(Spectrum input)Converts a KNIR spectrum into a Webservice one.static SpectrumTransformSpectrumHelper. knirToWebservice(Spectrum input)Converts a KNIR spectrum into a Webservice one. -
Uses of Spectrum in adams.flow.standalone.rats
Fields in adams.flow.standalone.rats with type parameters of type Spectrum Modifier and Type Field Description protected List<Spectrum>WSSpectrumReception. m_Datathe spectrum received via webservice.Methods in adams.flow.standalone.rats with parameters of type Spectrum Modifier and Type Method Description voidWSSpectrumReception. setData(Spectrum value)For setting the data received from the webservice. -
Uses of Spectrum in adams.flow.transformer
Fields in adams.flow.transformer declared as Spectrum Modifier and Type Field Description protected SpectrumSpectrumMinMax. m_Maxthe maximum spectrum.protected SpectrumSpectrumMinMax. m_Minthe minimum spectrum.Methods in adams.flow.transformer that return Spectrum Modifier and Type Method Description protected SpectrumSpectralAngleMapper. getInput()Gets the input spectrum from the input token.protected Spectrum[]SpectralAngleMapper. getReferences(adams.flow.control.StorageName name, String cache)Retrieves the reference spectra from storage.SpectrumSpectrumDbWriter. load(adams.db.DataProvider provider, Spectrum cont)Loads the container from the database.Methods in adams.flow.transformer that return types with arguments of type Spectrum Modifier and Type Method Description protected adams.db.DataProvider<Spectrum>DeleteSpectrum. getDataProvider()Returns the data provider to use for storing the container in the database.adams.db.DataProvider<Spectrum>SpectrumDbReader. getDataProvider()Returns the data provider to use for storing the container in the database.adams.db.DataProvider<Spectrum>SpectrumDbWriter. getDataProvider(Spectrum cont)Returns the data provider to use for storing the container in the database.protected adams.data.io.output.AbstractDataContainerWriter<Spectrum>SpectrumFileWriter. getDefaultWriter()Returns the default writer to use.Methods in adams.flow.transformer with parameters of type Spectrum Modifier and Type Method Description IntegerSpectrumDbWriter. add(adams.db.DataProvider provider, Spectrum cont)Adds the container to the database.protected voidSpectrumAppend. append(Spectrum stored, Spectrum current)Appends the current data container to the stored one.protected double[]SpectralAngleMapper. calculateSpectralAngles(Spectrum input, Spectrum[] references)Performs the calculation of spectral angles between the input spectrum and each reference spectrum.protected voidSpectralAngleMapper. checkInput(Spectrum input)Checks the input spectrum for validity.protected voidSpectralAngleMapper. checkInputVersusReferences(Spectrum input, Spectrum[] references)Checks that the input and the references are able to be angle-mapped.protected voidSpectralAngleMapper. checkReferences(Spectrum[] references)Checks the reference spectra for validity.protected voidSpectralAngleMapper. checkWaveNumberAlignment(Spectrum input, Spectrum[] references)Checks that the input and reference spectra have the same wave-number profile.booleanSpectrumDbWriter. exists(adams.db.DataProvider provider, Spectrum cont)Returns whether the container already exists in the database.adams.db.DataProvider<Spectrum>SpectrumDbWriter. getDataProvider(Spectrum cont)Returns the data provider to use for storing the container in the database.SpectrumSpectrumDbWriter. load(adams.db.DataProvider provider, Spectrum cont)Loads the container from the database.booleanSpectrumDbWriter. remove(adams.db.DataProvider provider, Spectrum cont)Removes the container from the database.protected double[]SpectralAngleMapper. toDoubleArray(Spectrum spectrum)Converts a spectrum into a double array of its wave amplitudes. -
Uses of Spectrum in adams.flow.transformer.datacontainer
Methods in adams.flow.transformer.datacontainer that return Spectrum Modifier and Type Method Description protected SpectrumLoadSampleData. doPostProcess(Spectrum data)Performs the actual post-processing.protected SpectrumUpdateDatabaseID. doPreProcess(Spectrum data)Performs the actual pre-processing.Methods in adams.flow.transformer.datacontainer with parameters of type Spectrum Modifier and Type Method Description protected SpectrumLoadSampleData. doPostProcess(Spectrum data)Performs the actual post-processing.protected SpectrumUpdateDatabaseID. doPreProcess(Spectrum data)Performs the actual pre-processing. -
Uses of Spectrum in adams.flow.webservice
Fields in adams.flow.webservice declared as Spectrum Modifier and Type Field Description protected SpectrumPut. m_SpectrumIninput spectrumprotected SpectrumTransform. m_SpectrumIninput spectrumMethods in adams.flow.webservice with parameters of type Spectrum Modifier and Type Method Description voidPut. setRequestData(Spectrum value)Sets the data for the request, if any.voidTransform. setRequestData(Spectrum value)Sets the data for the request, if any. -
Uses of Spectrum in adams.flow.webservice.spectrum
Fields in adams.flow.webservice.spectrum declared as Spectrum Modifier and Type Field Description protected SpectrumUpload. m_SpectrumIninput spectrumMethods in adams.flow.webservice.spectrum with parameters of type Spectrum Modifier and Type Method Description voidUpload. setRequestData(Spectrum value)Sets the data for the request, if any. -
Uses of Spectrum in adams.gui.chooser
Methods in adams.gui.chooser that return types with arguments of type Spectrum Modifier and Type Method Description protected adams.data.io.input.AbstractDataContainerReader<Spectrum>SpectrumFileChooser. getDefaultReader()Returns the default reader.protected adams.data.io.output.AbstractDataContainerWriter<Spectrum>SpectrumFileChooser. getDefaultWriter()Returns the default writer. -
Uses of Spectrum in adams.gui.visualization.spectrum
Fields in adams.gui.visualization.spectrum declared as Spectrum Modifier and Type Field Description protected SpectrumSpectrumTableModel. m_Datathe underlying spectrum.Fields in adams.gui.visualization.spectrum with type parameters of type Spectrum Modifier and Type Field Description protected adams.data.filter.Filter<Spectrum>SpectrumExplorer. m_CurrentFilterthe current filter.Methods in adams.gui.visualization.spectrum that return Spectrum Modifier and Type Method Description SpectrumSpectrumContainer. getData()Returns the stored spectrum.SpectrumSpectrumTableModel. getData()Returns the underlying spectrum.Spectrum[]SpectrumPanel. getSelectedSpectra()Returns the selected spectra.Methods in adams.gui.visualization.spectrum with parameters of type Spectrum Modifier and Type Method Description voidHistogramFactory.Dialog. add(adams.data.statistics.ArrayHistogram hist, Spectrum c)Adds a plot of the given spectrum.voidHistogramFactory.Dialog. add(adams.data.statistics.ArrayHistogram hist, Spectrum c, String name)Adds a plot of the given spectrum.voidHistogramFactory.Panel. add(adams.data.statistics.ArrayHistogram hist, Spectrum c)Adds a plot of the given spectrum.voidHistogramFactory.Panel. add(adams.data.statistics.ArrayHistogram hist, Spectrum c, String name)Adds a plot of the given spectrum.voidSpectrumPanelWithSampleData. display(Spectrum data)Displays the spectrum.protected voidSimpleSpectrumPaintlet. drawData(Graphics g, Spectrum data, Color color)Draws the data with the given color.protected voidSpectrumPaintlet. drawData(Graphics g, Spectrum data, Color color, SpectrumPaintlet.MarkerShape marker)Draws the data with the given color.voidSpectrumContainer. setData(Spectrum value)Sets the spectrum.Method parameters in adams.gui.visualization.spectrum with type arguments of type Spectrum Modifier and Type Method Description voidSpectrumExplorer. filter(adams.gui.event.FilterEvent<Spectrum> e)Filters the data.Constructors in adams.gui.visualization.spectrum with parameters of type Spectrum Constructor Description SpectrumContainer(SpectrumContainerManager manager, Spectrum data)Initializes the container.SpectrumTableModel(Spectrum data)Initializes the model with the specified spectrum. -
Uses of Spectrum in adams.gui.visualization.spectrum.containerlistpopup
Method parameters in adams.gui.visualization.spectrum.containerlistpopup with type arguments of type Spectrum Modifier and Type Method Description voidInformation. customize(adams.gui.visualization.container.datacontainerpanel.containerlistpopup.AbstractContainerListPopupCustomizer.Context<Spectrum,SpectrumContainerManager,SpectrumContainer> context, JPopupMenu menu)Returns a popup menu for the table of the container list.voidSampleData. customize(adams.gui.visualization.container.datacontainerpanel.containerlistpopup.AbstractContainerListPopupCustomizer.Context<Spectrum,SpectrumContainerManager,SpectrumContainer> context, JPopupMenu menu)Returns a popup menu for the table of the container list.voidSpectralData. customize(adams.gui.visualization.container.datacontainerpanel.containerlistpopup.AbstractContainerListPopupCustomizer.Context<Spectrum,SpectrumContainerManager,SpectrumContainer> context, JPopupMenu menu)Returns a popup menu for the table of the container list.booleanInformation. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanSampleData. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanSpectralData. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel. -
Uses of Spectrum in adams.gui.visualization.spectrum.plotpopup
Method parameters in adams.gui.visualization.spectrum.plotpopup with type arguments of type Spectrum Modifier and Type Method Description protected voidViewport. chooseColor(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, List<SpectrumContainer> conts)Allows the user to choose the color for all the spectra.protected List<SpectrumContainer>Viewport. containersInViewport(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Locates the visible spectra that are on display in the current viewport.voidAdjust. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidCrossHair. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidExportVisible. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidGotoWaveNumber. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidHistogram. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidHits. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidSaveVisible. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidStatistics. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.voidViewport. customize(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, MouseEvent e, JPopupMenu menu)Returns a popup menu for the table of the container list.protected voidViewport. display(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, List<SpectrumContainer> conts)Displays the IDs etc of the spectra.booleanAdjust. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanCrossHair. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanExportVisible. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanGotoWaveNumber. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanHistogram. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanHits. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanSaveVisible. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanStatistics. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.booleanViewport. handles(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel)Checks whether this action can handle the panel.protected voidViewport. hide(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, List<SpectrumContainer> conts)Allows the user to hide the spectra.protected voidViewport. hideOthers(adams.gui.visualization.container.DataContainerPanelWithContainerList<Spectrum,SpectrumContainerManager,SpectrumContainer> panel, List<SpectrumContainer> conts)Allows the user to hide all other spectra.
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