Uses of Class adams.data.heatmap.Heatmap (adams-addons-pom 24.12.0-SNAPSHOT API)

Packages that use Heatmap
Package	Description
adams.data.conversion
adams.data.featuregenerator
adams.data.filter
adams.data.filter.heatmapcrop
adams.data.filter.heatmapthreshold
adams.data.heatmap
adams.data.heatmapfeatures
adams.data.io.output
adams.flow.container
adams.flow.transformer.multiheatmapoperation
adams.gui.chooser
adams.gui.visualization.heatmap
adams.gui.visualization.heatmap.overlay
adams.gui.visualization.heatmap.plugins

Uses of Heatmap in adams.data.conversion

Methods in adams.data.conversion with parameters of type Heatmap
Modifier and Type	Method	Description
`double`	HeatmapToBufferedImage.`grayToIntensity(Heatmap map, int gray)`	Turns the gray value back into an intensity value.
`double`	HeatmapToBufferedImageConversion.`grayToIntensity(Heatmap map, int gray)`	Turns the gray value back into an intensity value.
`double`	HeatmapToBufferedImageWithKey.`grayToIntensity(Heatmap map, int gray)`	Turns the gray value back into an intensity value.

Uses of Heatmap in adams.data.featuregenerator

Methods in adams.data.featuregenerator that return Heatmap
Modifier and Type	Method	Description
`Heatmap`	AbstractFeatureGenerator.`generate(Heatmap data)`	Generates the features and adds them to the report.
`protected abstract Heatmap`	AbstractFeatureGenerator.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	FilteredFeatureGenerator.`processData(Heatmap data)`	Processes the data/report.
`protected Heatmap`	Max.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Mean.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Median.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Min.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	MultiGenerator.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	PassThrough.`processData(Heatmap data)`	Does nothing with the report.

Methods in adams.data.featuregenerator with parameters of type Heatmap
Modifier and Type	Method	Description
`protected Double`	AbstractFeatureGenerator.`addFeature(Heatmap data, double value)`	Adds the specified feature.
`protected Double`	AbstractFeatureGenerator.`addFeature(Heatmap data, String suffix, double value)`	Adds the specified feature.
`protected void`	AbstractFeatureGenerator.`checkData(Heatmap data)`	The default implementation only checks whether there is any data set.
`Heatmap`	AbstractFeatureGenerator.`generate(Heatmap data)`	Generates the features and adds them to the report.
`protected abstract Heatmap`	AbstractFeatureGenerator.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	FilteredFeatureGenerator.`processData(Heatmap data)`	Processes the data/report.
`protected Heatmap`	Max.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Mean.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Median.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	Min.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	MultiGenerator.`processData(Heatmap data)`	Performs the actual feature generation.
`protected Heatmap`	PassThrough.`processData(Heatmap data)`	Does nothing with the report.

Uses of Heatmap in adams.data.filter

Methods in adams.data.filter that return Heatmap
Modifier and Type	Method	Description
`protected Heatmap`	HeatmapCentroid.`findCentroid(Heatmap data)`	Finds the centroid.
`protected Heatmap`	HeatmapCentroid.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapCrop.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapFeatureGenerator.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapNormalize.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapNormalizeToField.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapRotate.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapStandardize.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapSubmap.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapSubtractField.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapThreshold.`processData(Heatmap data)`	Performs the actual filtering.

Methods in adams.data.filter with parameters of type Heatmap
Modifier and Type	Method	Description
`protected Heatmap`	HeatmapCentroid.`findCentroid(Heatmap data)`	Finds the centroid.
`protected Heatmap`	HeatmapCentroid.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapCrop.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapFeatureGenerator.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapNormalize.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapNormalizeToField.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapRotate.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapStandardize.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapSubmap.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapSubtractField.`processData(Heatmap data)`	Performs the actual filtering.
`protected Heatmap`	HeatmapThreshold.`processData(Heatmap data)`	Performs the actual filtering.

Uses of Heatmap in adams.data.filter.heatmapcrop

Methods in adams.data.filter.heatmapcrop that return Heatmap
Modifier and Type	Method	Description
`Heatmap`	AbstractHeatmapCrop.`crop(Heatmap map)`	Crops the given heatmap.
`static Heatmap`	CropToCentroid.`crop(Heatmap original, int centroidY, int centroidX, int height, int width)`	Crops the heatmap around the centroid stored in the heatmap's report.
`protected Heatmap`	AbstractFilteredHeatmapCrop.`doCrop(Heatmap data)`	Performs the actual filtering.
`protected abstract Heatmap`	AbstractFilteredHeatmapCrop.`doCrop(Heatmap filtered, Heatmap original)`	Performs the actual cropping, using the pre-filtered heatmap to manipulate the original heatmap.
`protected abstract Heatmap`	AbstractHeatmapCrop.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	CropToCentroid.`doCrop(Heatmap filtered, Heatmap original)`	Performs the actual cropping, using the pre-filtered heatmap to manipulate the original heatmap.
`protected Heatmap`	Dummy.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	Rectangle.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	Submap.`doCrop(Heatmap map)`	Performs the actual cropping.

Methods in adams.data.filter.heatmapcrop with parameters of type Heatmap
Modifier and Type	Method	Description
`protected void`	AbstractHeatmapCrop.`check(Heatmap map)`	Checks whether the heatmap can be processed, throws an `IllegalArgumentException` if not.
`Heatmap`	AbstractHeatmapCrop.`crop(Heatmap map)`	Crops the given heatmap.
`static Heatmap`	CropToCentroid.`crop(Heatmap original, int centroidY, int centroidX, int height, int width)`	Crops the heatmap around the centroid stored in the heatmap's report.
`protected Heatmap`	AbstractFilteredHeatmapCrop.`doCrop(Heatmap data)`	Performs the actual filtering.
`protected abstract Heatmap`	AbstractFilteredHeatmapCrop.`doCrop(Heatmap filtered, Heatmap original)`	Performs the actual cropping, using the pre-filtered heatmap to manipulate the original heatmap.
`protected abstract Heatmap`	AbstractHeatmapCrop.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	CropToCentroid.`doCrop(Heatmap filtered, Heatmap original)`	Performs the actual cropping, using the pre-filtered heatmap to manipulate the original heatmap.
`protected Heatmap`	Dummy.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	Rectangle.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected Heatmap`	Submap.`doCrop(Heatmap map)`	Performs the actual cropping.
`protected void`	AbstractHeatmapCrop.`postCrop(Heatmap map)`	Hook method after the crop happened.
`protected void`	AbstractHeatmapCrop.`preCrop(Heatmap map)`	Hook method before the crop happens.

Uses of Heatmap in adams.data.filter.heatmapthreshold

Methods in adams.data.filter.heatmapthreshold with parameters of type Heatmap
Modifier and Type	Method	Description
`double`	AbstractHeatmapThreshold.`calcThreshold(Heatmap map)`	Calculates the threshold for the given heatmap.
`protected void`	AbstractHeatmapThreshold.`check(Heatmap map)`	Checks whether the heatmap can be processed, throws an `IllegalArgumentException` if not.
`protected double`	AbstractBufferedImageBasedHeatmapThreshold.`doCalcThreshold(Heatmap map)`	Performs the actual calculation of the threshold.
`protected abstract double`	AbstractBufferedImageBasedHeatmapThreshold.`doCalcThreshold(Heatmap map, BufferedImage img)`	Performs the actual calculation of the threshold using the image.
`protected abstract double`	AbstractHeatmapThreshold.`doCalcThreshold(Heatmap map)`	Performs the actual calculation of the threshold.
`protected double`	Manual.`doCalcThreshold(Heatmap map)`	Performs the actual calculation of the threshold.
`protected double`	Otsu.`doCalcThreshold(Heatmap map, BufferedImage img)`	Performs the actual calculation of the threshold using the image.

Uses of Heatmap in adams.data.heatmap

Fields in adams.data.heatmap declared as Heatmap
Modifier and Type	Field	Description
`protected Heatmap`	HeatmapStatistic.`m_Heatmap`	the heatmap to create the statistics for.
`protected Heatmap`	HeatmapValue.`m_Parent`	the parent.

Methods in adams.data.heatmap that return Heatmap
Modifier and Type	Method	Description
`static Heatmap`	Heatmap.`fromIntensityString(int rows, int cols, String intensity)`	Creates a heatmap from the intensity string using the specified dimensions.
`Heatmap`	Heatmap.`getClone()`	Returns a clone of the object.
`Heatmap`	Heatmap.`getHeader()`	Returns an empty container with the same meta-data as this one.
`Heatmap`	Heatmap.`getHeader(int height, int width)`	Returns an empty container with the same meta-data as this one, but with different dimensions of the map.
`Heatmap`	HeatmapStatistic.`getHeatmap()`	Returns the underlying heatmap.
`Heatmap`	HeatmapValue.`getParent()`	Returns the heatmap this point belongs to.
`Heatmap`	Heatmap.`submap(int row, int col, int height, int width)`	Returns the specified submap.

Methods in adams.data.heatmap with parameters of type Heatmap
Modifier and Type	Method	Description
`void`	HeatmapStatistic.`setHeatmap(Heatmap value)`	Sets the heatmap to generate the statistics for.

Constructors in adams.data.heatmap with parameters of type Heatmap
Constructor	Description
`HeatmapStatistic(Heatmap map)`	Initializes the statistics with the specified heatmap.

Uses of Heatmap in adams.data.heatmapfeatures

Methods in adams.data.heatmapfeatures with parameters of type Heatmap
Modifier and Type	Method	Description
`protected void`	AbstractHeatmapFeatureGenerator.`checkData(Heatmap map)`	Optional checks of the heatmap.
`protected void`	AbstractScriptedFeatureGenerator.`checkData(Heatmap map)`	Optional checks of the heatmap.
`protected void`	Scripted.`checkData(Heatmap map)`	Optional checks of the heatmap.
`abstract adams.data.featureconverter.HeaderDefinition`	AbstractHeatmapFeatureGenerator.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	CountValues.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Histogram.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Max.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Mean.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Median.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Min.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	MultiFeatureGenerator.`createHeader(Heatmap map)`	Creates the header from a template image.
`adams.data.featureconverter.HeaderDefinition`	Scripted.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	StandardDeviation.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`adams.data.featureconverter.HeaderDefinition`	Values.`createHeader(Heatmap map)`	Creates the header from a template heatmap.
`Object[]`	AbstractHeatmapFeatureGenerator.`generate(Heatmap map)`	Process the given heatmap.
`abstract List<Object>[]`	AbstractHeatmapFeatureGenerator.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	CountValues.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Histogram.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Max.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Mean.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Median.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Min.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	MultiFeatureGenerator.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Scripted.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	StandardDeviation.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>[]`	Values.`generateRows(Heatmap map)`	Performs the actual feature generation.
`List<Object>`	AbstractHeatmapFeatureGenerator.`postProcessRow(Heatmap map, List<Object> data)`	Post-processes the generated row, adding notes and fields.
`List<Object>[]`	AbstractHeatmapFeatureGenerator.`postProcessRows(Heatmap map, List<Object>[] data)`	Post-processes the generated rows, adding notes and fields.

Uses of Heatmap in adams.data.io.output

Method parameters in adams.data.io.output with type arguments of type Heatmap
Modifier and Type	Method	Description
`protected void`	AbstractHeatmapWriter.`checkData(List<Heatmap> data)`	The default implementation only checks whether the provided file is an actual file and whether it exists (if m_OutputIsFile is TRUE).
`protected boolean`	SimpleHeatmapWriter.`write(List<Heatmap> data, BufferedWriter writer, boolean report)`	Writes its content with the given writer.
`protected boolean`	SimpleHeatmapWriter.`write(List<Heatmap> data, String filename, boolean report)`	Writes its content to the given file.
`protected boolean`	FloatMatrixHeatmapWriter.`writeData(List<Heatmap> data)`	Performs the actual writing.
`protected boolean`	SimpleHeatmapWriter.`writeData(List<Heatmap> data)`	Performs the actual writing.
`protected boolean`	SimpleImageHeatmapWriter.`writeData(List<Heatmap> data)`	Performs the actual writing.
`protected boolean`	SpreadSheetHeatmapWriter.`writeData(List<Heatmap> data)`	Performs the actual writing.

Uses of Heatmap in adams.flow.container

Constructors in adams.flow.container with parameters of type Heatmap
Constructor	Description
`HeatmapFilterContainer(Object input, adams.data.filter.Filter filter, Heatmap data)`	Initializes the container with the filter and the associated data.

Uses of Heatmap in adams.flow.transformer.multiheatmapoperation

Methods in adams.flow.transformer.multiheatmapoperation that return Heatmap
Modifier and Type	Method	Description
`protected Heatmap`	Add.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap[]`	AddConstant.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap[]`	PassThrough.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap`	Subtract.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.

Methods in adams.flow.transformer.multiheatmapoperation with parameters of type Heatmap
Modifier and Type	Method	Description
`protected void`	AbstractMultiHeatmapOperation.`check(Heatmap[] maps)`	Checks the heatmaps.
`protected void`	Add.`check(Heatmap[] maps)`	Checks the heatmaps.
`protected void`	Subtract.`check(Heatmap[] maps)`	Checks the heatmaps.
`protected abstract O`	AbstractMultiHeatmapOperation.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap`	Add.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap[]`	AddConstant.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap[]`	PassThrough.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`protected Heatmap`	Subtract.`doProcess(Heatmap[] maps, adams.core.MessageCollection errors)`	Performs the actual processing of the heatmaps.
`O`	AbstractMultiHeatmapOperation.`process(Heatmap[] maps, adams.core.MessageCollection errors)`	Processes the heatmaps.

Uses of Heatmap in adams.gui.chooser

Methods in adams.gui.chooser that return types with arguments of type Heatmap
Modifier and Type	Method	Description
`protected adams.data.io.input.AbstractDataContainerReader<Heatmap>`	HeatmapFileChooser.`getDefaultReader()`	Returns the default reader.
`protected adams.data.io.output.AbstractDataContainerWriter<Heatmap>`	HeatmapFileChooser.`getDefaultWriter()`	Returns the default writer.
`adams.data.io.input.AbstractDataContainerReader<Heatmap>`	HeatmapFileChooser.`getReaderForFile(File file)`	Returns the reader for the specified file.
`adams.data.io.output.AbstractDataContainerWriter<Heatmap>`	HeatmapFileChooser.`getWriterForFile(File file)`	Returns the writer for the specified file.

Uses of Heatmap in adams.gui.visualization.heatmap

Fields in adams.gui.visualization.heatmap declared as Heatmap
Modifier and Type	Field	Description
`protected Heatmap`	HeatmapPanel.`m_Heatmap`	the heatmap on display.

Fields in adams.gui.visualization.heatmap with type parameters of type Heatmap
Modifier and Type	Field	Description
`protected adams.data.filter.Filter<Heatmap>`	HeatmapViewerPanel.`m_CurrentFilter`	the current filter.

Methods in adams.gui.visualization.heatmap that return Heatmap
Modifier and Type	Method	Description
`Heatmap`	HeatmapPanel.`getHeatmap()`	The current heatmap on display.

Methods in adams.gui.visualization.heatmap with parameters of type Heatmap
Modifier and Type	Method	Description
`protected HeatmapPanel`	HeatmapViewerPanel.`newPanel(Heatmap map)`	Creates a new panel and configures it.
`void`	HeatmapViewerPanel.`newTab(Heatmap map, String comment)`	Adds a new tab using the heatmap and adds the comment to the log.
`void`	HeatmapPanel.`setHeatmap(Heatmap value)`	Sets the heatmap to display.

Method parameters in adams.gui.visualization.heatmap with type arguments of type Heatmap
Modifier and Type	Method	Description
`void`	HeatmapViewerPanel.`filter(adams.gui.event.FilterEvent<Heatmap> e)`	Filters the data.

Constructors in adams.gui.visualization.heatmap with parameters of type Heatmap
Constructor	Description
`HeatmapContainer(HeatmapContainerManager manager, Heatmap payload)`	Initializes the container.

Uses of Heatmap in adams.gui.visualization.heatmap.overlay

Methods in adams.gui.visualization.heatmap.overlay with parameters of type Heatmap
Modifier and Type	Method	Description
`protected void`	HighestTemperature.`locate(Heatmap map)`	Locates the points with the highest temperature.
`protected void`	LowestTemperature.`locate(Heatmap map)`	Locates the points with the highest temperature.

Uses of Heatmap in adams.gui.visualization.heatmap.plugins

Methods in adams.gui.visualization.heatmap.plugins that return Heatmap
Modifier and Type	Method	Description
`protected abstract Heatmap`	AbstractCurrentHeatmapFilterWithGOE.`doFilter(Heatmap heatmap)`	Performs the actual filtering of the heatmap.
`protected abstract Heatmap`	AbstractCurrentHeatmapFilter.`filter(Heatmap heatmap)`	Filters the heatmap.
`protected Heatmap`	AbstractCurrentHeatmapFilterWithGOE.`filter(Heatmap heatmap)`	Filters the heatmap.
`protected abstract Heatmap`	AbstractSelectedHeatmapsFilter.`filter(Heatmap heatmap)`	Filters the heatmap.

Methods in adams.gui.visualization.heatmap.plugins with parameters of type Heatmap
Modifier and Type	Method	Description
`protected abstract Heatmap`	AbstractCurrentHeatmapFilterWithGOE.`doFilter(Heatmap heatmap)`	Performs the actual filtering of the heatmap.
`protected abstract Heatmap`	AbstractCurrentHeatmapFilter.`filter(Heatmap heatmap)`	Filters the heatmap.
`protected Heatmap`	AbstractCurrentHeatmapFilterWithGOE.`filter(Heatmap heatmap)`	Filters the heatmap.
`protected abstract Heatmap`	AbstractSelectedHeatmapsFilter.`filter(Heatmap heatmap)`	Filters the heatmap.

Uses of Classadams.data.heatmap.Heatmap

Uses of Heatmap in adams.data.conversion

Uses of Heatmap in adams.data.featuregenerator

Uses of Heatmap in adams.data.filter

Uses of Heatmap in adams.data.filter.heatmapcrop

Uses of Heatmap in adams.data.filter.heatmapthreshold

Uses of Heatmap in adams.data.heatmap

Uses of Heatmap in adams.data.heatmapfeatures

Uses of Heatmap in adams.data.io.output

Uses of Heatmap in adams.flow.container

Uses of Heatmap in adams.flow.transformer.multiheatmapoperation

Uses of Heatmap in adams.gui.chooser

Uses of Heatmap in adams.gui.visualization.heatmap

Uses of Heatmap in adams.gui.visualization.heatmap.overlay

Uses of Heatmap in adams.gui.visualization.heatmap.plugins

Uses of Class
adams.data.heatmap.Heatmap