Uses of Interface
adams.core.io.FileFormatHandler

Packages that use FileFormatHandler

Package	Description
adams.core.option
adams.data
adams.data.conversion
adams.data.io.input
adams.data.io.output
adams.gui.tools.previewbrowser.notes
adams.gui.visualization.debug.objectexport

Uses of FileFormatHandler in adams.core.option

Classes in adams.core.option that implement FileFormatHandler

Modifier and Type	Class	Description
class	AbstractActorJavaCodeProducer	Ancestor for producers that generate Java code from actors.
class	AbstractFlowJavaCodeProducer	Ancestor for producers that generate Java code from flows.
class	ActorExecutionClassProducer	Generates a wrapper class for executing an actor.
class	ApplyActorProducer	Generates a Java class that allows executing/applying an actor as a method.
class	DatabaseActorExecutionClassProducer	Generates a wrapper for an actor that works in conjunction with a database.
class	FlowJUnitTestProducer	Generates a JUnit test case for flows.
class	FlowStructureDotProducer	Outputs the flow structure in DOT (GraphViz) format.
class	FlowStructureGraphMLProducer	Outputs the flow structure in GraphML XML format.
class	HtmlHelpProducer	Generates the help for the GUI, i.e., HTML output.
class	HtmlParametersProducer	Generates HTML output of the parameters of an object (non-recursive).
class	JavaInstantiationProducer	Generates Java code for instantiating the object.
class	JsonClassDescriptionProducer	Generates a description of the class and its options in JSON format.
class	JsonConsumer	Recreates objects from a JSON representation.
class	JsonProducer	Generates the JSON format.
class	XhtmlProducer	Generates documentation in XHTML.

Uses of FileFormatHandler in adams.data

Subinterfaces of FileFormatHandler in adams.data

Modifier and Type	Interface	Description
interface	CompressionSupporter<T extends DataContainer>	Interface for DataContainerWriter classes that support compression.

Uses of FileFormatHandler in adams.data.conversion

Classes in adams.data.conversion that implement FileFormatHandler

Modifier and Type	Class	Description
static class	ByteArrayToDataContainer.DummyReader	Dummy reader.
static class	DataContainerToByteArray.DummyWriter	Dummy writer.
static class	DataContainerToString.DummyWriter	Dummy writer.
static class	StringToDataContainer.DummyReader	Dummy reader.

Uses of FileFormatHandler in adams.data.io.input

Subinterfaces of FileFormatHandler in adams.data.io.input

Modifier and Type	Interface	Description
interface	ChunkedSpreadSheetReader	Interface for spreadsheet readers that can read data in chunks rather than only all at once.
interface	DataContainerReader<T extends DataContainer>	Interface for readers that read files in various formats and turn them into data containers.
interface	EmailFileReader	Interface for readers that read from files.
interface	FlowReader	Interface for flow readers.
interface	ImageReader<T extends AbstractImageContainer>	Interface for image readers.
interface	ImageSegmentationAnnotationReader	Interface for readers for image segmentation annotations.
interface	ImageSegmentationAnnotationReaderWithLayerNames	Interface for image segmentation readers that make use of layer names.
interface	InitialRowSkippingSpreadSheetReader	Interface for spreadsheet readers that can skip initial rows.
interface	InputStreamImageReader<T extends AbstractImageContainer>	Interface for image readers that support reading from input streams.
interface	MissingValueSpreadSheetReader	Interface for spreadsheet readers that handle missing values.
interface	MultiSheetSpreadSheetReader<T extends Range>	Interface for spreadsheet readers that can read multiple sheets from the same document.
interface	NestedFlowReader	Interface for flow readers that support the faster nested format.
interface	NoHeaderSpreadSheetReader	Interface for spreadsheet readers that support sheets with no headers.
interface	SpreadSheetReader	Interface for spreadsheet readers.
interface	StreamableBinaryDataContainerReader<T extends DataContainer>	Indicator interface for StreamableDataContainerReader classes that use binary data.
interface	StreamableDataContainerReader<T extends DataContainer>	Interface for DataContainerReader readers that can read from InputStreams.
interface	StreamableTextBasedDataContainerReader<T extends DataContainer>	Indicator interface for StreamableDataContainerReader classes that use text-based data.
interface	WindowedSpreadSheetReader	Allows the retrieval of a certain "window" of rows from the data.

Classes in adams.data.io.input that implement FileFormatHandler

Modifier and Type	Class	Description
class	AbstractAdamsExperimentReader	Ancestor for readers for ADAMS Experiments.
class	AbstractCustomPNGAnnotationImageSegmentationReader	Ancestor for readers that read the annotations from a single PNG file and allow the reader to be specified.
class	AbstractDataContainerReader<T extends DataContainer>	Abstract ancestor for readers that read files in various formats and turn them into data containers.
class	AbstractEmailFileReader	Ancestor of email readers that read emails from files.
class	AbstractExcelSpreadSheetReader<T extends Range>	Ancestor for special Excel readers.
class	AbstractFlowReader	Ancestor for classes that can read flows.
class	AbstractImageReader<T extends AbstractImageContainer>	Ancestor for image readers.
class	AbstractImageSegmentationAnnotationReader	Ancestor for readers for image segmentation annotations.
class	AbstractIndexedSplitsRunsReader	Ancestor for readers that load files containing IndexedSplitsRuns.
class	AbstractMultiSheetSpreadSheetReader<T extends Range>	Ancestor for spreadsheet readers that can read multiple sheets from a document in one go.
class	AbstractMultiSheetSpreadSheetReaderWithMissingValueSupport<T extends Range>	Ancestor for spreadsheet readers that allow the specification of a custom missing value string.
class	AbstractNestedFlowReader	Ancestor for flow readers that support the nested format as well.
class	AbstractObjectReader	Ancestor for object readers.
class	AbstractParameterMapReader	Ancestor for classes that read parameter maps.
class	AbstractPNGAnnotationImageSegmentationReader	Ancestor for readers that read the annotations from a single PNG file.
class	AbstractReportReader<T extends Report>	Abstract ancestor for readers that read files in various formats and creates a reports.
class	AbstractSimpleCSVReportReader<T extends Report>	Abstract ancestor for reports to be written in CSV format.
class	AbstractSimpleJsonReportReader<T extends Report>	Abstract ancestor for reports to be written in CSV format.
class	AbstractSimpleReportReader<T extends Report>	Abstract ancestor for reports to be written in properties format.
class	AbstractSpreadSheetReader	Ancestor for classes that can read spreadsheets.
class	AbstractSpreadSheetReaderWithMissingValueSupport	Ancestor for spreadsheet readers that allow the specification of a custom missing value string.
class	AbstractTimeseriesReader	Ancestor for timeseries readers.
class	AbstractWekaSpreadSheetReader	Ancestor for WEKA file format readers.
class	AccessSpreadSheetReader	Allows the reading of MS Access databases.
class	ApacheCommonsImageReader	Apache Commons image reader for: bmp, gif, ico, pbm, pgm, png, pnm, ppm, psd, tif, tiff
class	ArffSpreadSheetReader	Reads WEKA datasets in ARFF format and turns them into spreadsheets.
class	AutoWidthTabularSpreadSheetReader	Reads simple tabular text files, using column widths as defined by the header row.
class	BlueChannelImageSegmentationReader	The layers are stored in the blue channel, with 0 being the background.
class	BoofCVImageReader	BoofCV image reader for: bmp, gif, jpeg, jpg, pgm, png, ppm, wbmp For more information see: http://boofcv.org/
class	CocoAnnotationsReportReader	Loads COCO annotations from the JSON file, with one report per image. Handles only segmentations with polygons (not RLE) and only one polygon per annotation.
class	CommandlineReader	Loads objects using the commandline store in the file.
class	CsvSpreadSheetReader	Reads CSV files. It is possible to force columns to be text.
class	DeepLabCutCSVReader	Reads point annotations into multiple reports from DeepLabCut's CSV format.
class	DefaultFlowReader	Reads flows in the default format (nested).
class	DefaultSimpleCSVReportReader	Default implementation of a report reader of the simple CSV format.
class	DefaultSimpleJsonReportReader	Default implementation of a report reader of the simple Json format.
class	DefaultSimpleReportReader	Default implementation of a report reader of the simple format.
class	DetectronAnnotationsReportReader	Interprets rectangle annotations present in Detectron annotations JSON file.
class	EmlEmailFileReader	Reads emails stored in EML files.
class	ExcelSpreadSheetReader	Reads MS Excel files (using DOM).
class	ExcelStreamingSpreadSheetReader	Reads large MS Excel XML files (using streaming via SAX). Increasing the debug level to more than 1 results in outputting detailed information on cells.
class	FastCsvSpreadSheetReader	Simplified CSV spreadsheet reader for loading large files.
class	FixedTabularSpreadSheetReader	Reads simple tabular text files with fixed column widths, as used by dot matrix printers in days gone by.
class	GnumericSpreadSheetReader	Reads Gnumeric workbook files (GZIP compressed or uncompressed XML), version 1.10.13.
class	GrayscaleImageSegmentationReader	The layers are stored as grayscale values, with 0 being the background.
class	ImageClassificationGridSpreadSheetReader	Turns grid cells in the spreadsheet with labels ('label=score') into object locations. Spreadsheet format: y,x,label1,label2,... 0,0,cat=0.98,,... 0,1,,,... 0,2,dog=0.9,cat=0.2,...
class	ImageClassificationJsonReportReader	Retrieves the label with the highest score from the JSON file and stores them in a report. JSON file format: { LABEL1: SCORE1; LABEL2: SCORE2; }
class	ImageClassificationSpreadSheetReportReader	Retrieves the label with the highest score from the spreadsheet and stores them in a report.
class	IndexedPNGImageSegmentationReader	The layers are stored in the blue channel, with 0 being the background.
class	IndividualImageSegmentationLayerReader	Uses a JPG as base image and indexed PNG files for the individual layers (0 = background, 1 = annotation).
class	InstanceReader	Reads WEKA datasets in various formats.
class	JAIImageReader	Java Advanced Imaging (JAI) image reader for: jpg, bmp, gif, png, jpeg, wbmp
class	JsonAdamsExperimentReader	Reads ADAMS Experiments in JSON format.
class	JsonFlowReader	Reads flows in JSON format.
class	JsonIndexedSplitsRunsReader	Reads runs of indexed splits from JSON.
class	JsonParameterMapReader	Reads parameters in JSON format.
class	JSONSpreadSheetReader	Reads WEKA datasets in JSON format and turns them into spreadsheets.
class	LibSVMSpreadSheetReader	Reads WEKA datasets in LibSVM format and turns them into spreadsheets.
class	Mat5SpreadSheetReader	Reads Matlab .mat files (format 5)
class	MatlabSpreadSheetReader	Reads WEKA datasets in ARFF format and turns them into spreadsheets.
class	NestedAdamsExperimentReader	Reads ADAMS Experiments in nested format.
class	NestedCommandlineReader	Loads objects using the commandline store in the file (nested format).
class	ObjectLocationsSpreadSheetReader	Reads object locations from a spreadsheet into a report. Top/left column is required. Either right/bottom or width/height need to be supplied. In addition, polygon coordinates (X and Y coordinates as comma-separated lists in two separate columns) can be read as well. If the coordinates/dimensions represent normalized ones (ie 0-1), then specify the width/height of the image to relate them back to actual pixel-based sizes.
class	ODFSpreadSheetReader	Reads ODF (Open Document Format) spreadsheet files. If a row contains only empty cells, this is interpreted as the end of the sheet.
class	OpenCVImageReader	Reads images using OpenCV.
class	OpexObjectLocationsReader	Reads object locations from JSON generated by the opex library. See more: https://github.com/WaikatoLink2020/objdet-predictions-exchange-format
class	PascalVOCObjectLocationsReader	Reads object locations in Pascal VOC format. See more: https://github.com/WaikatoLink2020/objdet-predictions-exchange-format
class	PNGImageReader	Reads images in PNG format.
class	PNGSpreadSheetReader	Reads PNGs as spreadsheet, e.g., for reading indexed PNGs.
class	PropertiesEmailFileReader	Reads emails stored in properties files.
class	PropertiesIndexedSplitsRunsReader	Reads runs of indexed splits from .props files.
class	PropertiesSpreadSheetReader	Turns Java properties files into spreadsheets with two columns: Key and Value.
class	SerializableObjectReader	Loads a SerializableObject.
class	SerializedAdamsExperimentReader	Reads serialized ADAMS Experiments.
class	SerializedObjectReader	Loads objects using Java serialization.
class	SerializedParameterMapReader	Reads a parameter map from a serialized file.
class	SimpleArffSpreadSheetReader	Simple reader for Weka ARFF files, only supports NUMERIC, NOMINAL, STRING and DATE attributes.
class	SimpleCsvSpreadSheetReader	Reads CSV files. It is possible to force columns to be text.
class	SimpleStreamSpreadSheetReader	Reads file in simple stream format: - one spreadsheet row per line in the output - cells are separated by TAB - cell format: '<1-based index>:<content-type ID>:<content>' NB: tabs, new lines etc in the content get backquoted.
class	SimpleTimeseriesReader	Reader for the simple timeseries data format, CSV-like with preceding comments.
class	SpreadSheetTimeseriesReader	Reads timeseries containers from columns of a spreadsheet. A new container is started, whenever the value of the ID column changes (hence you need to ensure that the data is ordered on this column). However, it is not required to have an ID column present.
class	SqlDumpSpreadSheetReader	Reads in SQL dump files.
class	SVMLightSpreadSheetReader	Reads WEKA datasets in ARFF format and turns them into spreadsheets.
class	TsvSpreadSheetReader	Reads TSV (tab-separated values) files. It is possible to force columns to be text.
class	VggXmlAnnotationReportReader	Reads XML image annotation files, like used in the pets dataset: http://www.robots.ox.ac.uk/~vgg/data/pets/
class	ViaAnnotationsReportReader	Interprets polygon annotations generated by VGG Image Annotator. For more information, see: http://www.robots.ox.ac.uk/~vgg/software/via/
class	WekaClassifierModelReader	Reads Weka classifiers from serialized files.
class	XrffSpreadSheetReader	Reads WEKA datasets in ARFF format and turns them into spreadsheets.
class	XStreamReader	Loads objects using XStream.
class	YamlParameterMapReader	Stores the parameters in YAML format.
class	YoloAnnotationsReportReader	Reads text files with YOLO object annotations, one object definition per line: BBox format: - format: <object-class> <x> <y> <width> <height> - object-class: 0-based index - x/y: normalized center of annotation - width/height: normalized width/height - Normalization uses image width/height Polygon format: - format: <object-class> <x0> <y0> <x1> <y1>... - object-class: 0-based index - x/y: normalized polygon point

Uses of FileFormatHandler in adams.data.io.output

Subinterfaces of FileFormatHandler in adams.data.io.output

Modifier and Type	Interface	Description
interface	DataContainerWriter<T extends DataContainer>	Interface for writers that write data containers to files in various formats.
interface	EmailFileWriter	Interface for email writers that write to files.
interface	FlowWriter	Interface for flow writers.
interface	ImageSegmentationAnnotationWriter	Interface for writers for image segmentation annotations.
interface	ImageSegmentationAnnotationWriterWithLayerNames	Interface for image segmentation writers that make use of layer names.
interface	ImageWriter<T extends AbstractImageContainer>	Interface for image writers.
interface	NestedFlowWriter	Interface for flow writers that support the faster nested format.
interface	OutputStreamImageWriter<T extends AbstractImageContainer>	Interface for image writers that can write to output streams.
interface	StreamableBinaryDataContainerWriter<T extends DataContainer>	Indicator interface for StreamableDataContainerWriter classes that use binary data.
interface	StreamableDataContainerWriter<T extends DataContainer>	Interface for DataContainerWriter classes that can write to OutputStreams.
interface	StreamableTextBasedDataContainerWriter<T extends DataContainer>	Indicator interface for StreamableDataContainerWriter classes that use text-based data.

Classes in adams.data.io.output that implement FileFormatHandler

Modifier and Type	Class	Description
class	AbstractAdamsExperimentWriter	Ancestor for ADAMS Experiment writers.
class	AbstractDataContainerWriter<T extends DataContainer>	Abstract ancestor for writers that write data containers to files in various formats.
class	AbstractEmailFileWriter	Ancestor for email writers that write to files.
class	AbstractFlowWriter	Ancestor for classes that can write flow objects.
class	AbstractImageSegmentationAnnotationWriter	Ancestor for writers for image segmentation annotations.
class	AbstractImageWriter<T extends AbstractImageContainer>	Ancestor for image writers.
class	AbstractImplicitBackgroundPNGAnnotationImageSegmentationWriter	Ancestor for image segmentation annotation writers that store the annotations in a single PNG file and can use an implicit background.
class	AbstractIndexedSplitsRunsWriter	Ancestor for writers that writes files containing IndexedSplitsRuns.
class	AbstractMultiReportWriter<T extends Report>	Ancestor for report writers that write multiple reports into a single file.
class	AbstractNestedFlowWriter	Ancestor for flow writers that support the nested format.
class	AbstractObjectWriter	Ancestor for object writers.
class	AbstractParameterMapWriter	Ancestor for classes that write parameter maps.
class	AbstractPNGAnnotationImageSegmentationWriter	Ancestor for image segmentation annotation writers that store the annotations in a single PNG file.
class	AbstractReportWriter<T extends Report>	Abstract ancestor for writers that write reports to files in various formats.
class	AbstractSimpleCSVReportWriter<T extends Report>	Abstract ancestor for writing reports in CSV format.
class	AbstractSimpleJsonReportWriter<T extends Report>	Abstract ancestor for writing reports in Json format.
class	AbstractSimpleReportWriter<T extends Report>	Abstract ancestor for writing reports in properties format.
class	AbstractTimeseriesWriter	Ancestor for timeseries writers.
class	ApacheCommonsImageWriter	Apache Commons Imaging image writer for: bmp, gif, ico, pbm, pgm, png, pnm, ppm, tif, tiff
class	BlueChannelImageSegmentationWriter	The layers get stored in the blue channel, with 0 being the background.
class	BoofCVImageWriter	BoofCV image writer for: bmp, gif, jpeg, jpg, pgm, png, ppm, wbmp For more information see: http://boofcv.org/
class	CommandlineWriter	Writes the commandline of objects to disk.
class	DeepLabCutCSVWriter	Writes point annotations from multiple reports in DeepLabCut's CSV format. Expects the filename to be stored in the 'File' report field.
class	DefaultFlowWriter	Writes flows in the default format (nested).
class	DefaultSimpleCSVReportWriter	Default implementation of a report writer of the simple CSV format.
class	DefaultSimpleJsonReportWriter	Default implementation of a report writer of the simple Json format.
class	DefaultSimpleReportWriter	Default implementation of a report writer of the simple format.
class	GrayOrIndexedImageWriter	Changes the unique colors to the ones specified by the color provider. Useful for generating human-viewable images from image segmentation annotations. Uses adams.data.io.output.ApacheCommonsImageWriter for performing the actual writing after the conversion. See also: adams.data.io.output.ApacheCommonsImageWriter
class	GrayscaleImageSegmentationWriter	The layers get stored as grayscale values, with 0 being the background.
class	IndexedPNGImageSegmentationWriter	Each layer gets stored with a separate color in the palette.
class	IndividualImageSegmentationLayerWriter	Uses a JPG as base image and indexed PNG files for the individual layers (0 = background, 1 = annotation).
class	JAIExplicitImageWriter	Java Advanced Imaging (JAI) image writer using explicit image type writers.
class	JAIImageWriter	Java Advanced Imaging (JAI) image writer for: bmp, jpg, jpeg, wbmp, png, gif
class	JavaInstantiationWriter	Generates Java code from OptionHandler objects.
class	JsonAdamsExperimentWriter	Writes ADAMS experiments in JSON format.
class	JsonFlowWriter	Writes flows in JSON format.
class	JsonIndexedSplitsRunsWriter	Writes runs of indexed splits as JSON.
class	JsonParameterMapWriter	Writes parameters in JSON format.
class	NestedAdamsExperimentWriter	Writes ADAMS experiments in nested format.
class	NestedCommandlineWriter	Writes the commandline of objects to disk (in nested format).
class	ObjectLocationsSpreadSheetWriter
class	OpenCVImageWriter	Writes images using OpenCV.
class	OpexObjectLocationsWriter	Writes polygon annotations in VGG Image Annotator JSON format. For more information, see: http://www.robots.ox.ac.uk/~vgg/software/via/
class	PlainTextEmailFileWriter	Writes emails to text files. Handles only ASCII content.
class	PropertiesEmailFileWriter	Writes emails to properties files.
class	PropertiesIndexedSplitsRunsWriter	Writes runs of indexed splits as .props file.
class	SerializableObjectWriter	Writes objects that implement SerializableObject.
class	SerializedAdamsExperimentWriter	Writes serialized ADAMS experiments.
class	SerializedObjectWriter	Writes objects using Java serialization.
class	SerializedParameterMapWriter	Serializes a parameter map to a file.
class	SimpleJavaInstantiationWriter	Generates Java code from objects, using their command-line options to instantiate them.
class	SimpleTimeseriesWriter	Writer for the simply timeseries format, CSV-like with preceding comments.
class	SpreadSheetTimeseriesWriter	Writes timeseries data using a spreadsheet writer.
class	ViaAnnotationsReportWriter	Writes polygon annotations in VGG Image Annotator JSON format. For more information, see: http://www.robots.ox.ac.uk/~vgg/software/via/
class	XStreamWriter	Uses XStream to serialze objects.
class	YamlParameterMapWriter	Reads the parameters in YAML format.
class	YoloAnnotationsReportWriter	Writes text files with YOLO object annotations, one object definition per line: BBox format: - format: <object-class> <x> <y> <width> <height> - object-class: 0-based index - x/y: normalized center of annotation - width/height: normalized width/height - Normalization uses image width/height Polygon format: - format: <object-class> <x0> <y0> <x1> <y1>... - object-class: 0-based index - x/y: normalized polygon point

Uses of FileFormatHandler in adams.gui.tools.previewbrowser.notes

Classes in adams.gui.tools.previewbrowser.notes that implement FileFormatHandler

Modifier and Type	Class	Description
class	AbstractNotesReader	Ancestor for notes readers.
class	AbstractNotesWriter	Ancestor for notes writers.
class	CsvNotesReader	Reads notes in CSV format.
class	CsvNotesWriter	Writes the notes in CSV format.
class	JsonNotesReader	Reads notes in JSON format.
class	JsonNotesWriter	Writes the notes in JSON format.
class	PropertiesNotesReader	Reads notes in Java properties format.
class	PropertiesNotesWriter	Writes the notes in Java properties format.
class	YamlNotesReader	Reads notes in YAML format.
class	YamlNotesWriter	Writes the notes in JSON format.

Uses of FileFormatHandler in adams.gui.visualization.debug.objectexport

Classes in adams.gui.visualization.debug.objectexport that implement FileFormatHandler

Modifier and Type	Class	Description
class	AbstractObjectExporter	Ancestor for classes that can export certain objects to files.
class	ImageExporter	Exports image objects (BufferedImage or derived from AbstractImageContainer).
class	PlainTextExporter	Uses text renderers (auto or custom) to turn the object into text.
class	PropertiesExporter	Exports Properties objects in the simple report format.
class	RenderedPlainTextExporter	Uses an AbstractObjectPlainTextRenderer to generated the string to export.
class	ReportExporter	Exports Report objects in the simple report format.
class	SerializableObjectExporter	Exports serializable objects.
class	SpreadSheetExporter	Exports spreadsheet objects.
class	TimeseriesExporter	Exports Timeseries objects.
class	WekaInstancesExporter	Exports Weka Instances/Instance objects.