Uses of Class
adams.flow.container.ImageSegmentationContainer
-
-
Uses of ImageSegmentationContainer in adams.data.imagesegmentation.filter
Methods in adams.data.imagesegmentation.filter that return ImageSegmentationContainer Modifier and Type Method Description protected abstract ImageSegmentationContainer
AbstractImageSegmentationContainerFilter. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
Draw. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
MergeLayers. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
MultiFilter. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
PassThrough. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
RemoveOverlaps. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.ImageSegmentationContainer
AbstractImageSegmentationContainerFilter. filter(ImageSegmentationContainer cont)
Performs the filtering of the container.Methods in adams.data.imagesegmentation.filter with parameters of type ImageSegmentationContainer Modifier and Type Method Description protected String
AbstractImageSegmentationContainerFilter. check(ImageSegmentationContainer cont)
Hook method for checking the container before filtering.protected abstract ImageSegmentationContainer
AbstractImageSegmentationContainerFilter. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
Draw. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
MergeLayers. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
MultiFilter. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
PassThrough. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.protected ImageSegmentationContainer
RemoveOverlaps. doFilter(ImageSegmentationContainer cont)
Performs the filtering of the container.ImageSegmentationContainer
AbstractImageSegmentationContainerFilter. filter(ImageSegmentationContainer cont)
Performs the filtering of the container. -
Uses of ImageSegmentationContainer in adams.data.imagesegmentation.layerorder
Methods in adams.data.imagesegmentation.layerorder with parameters of type ImageSegmentationContainer Modifier and Type Method Description protected String
AbstractImageSegmentationContainerLayerOrder. check(ImageSegmentationContainer cont)
Hook method for performing checks prior to generating the layer order.protected abstract String[]
AbstractImageSegmentationContainerLayerOrder. doGenerate(ImageSegmentationContainer cont)
Generates the layer order.protected String[]
AsIs. doGenerate(ImageSegmentationContainer cont)
Generates the layer order.protected String[]
Predefined. doGenerate(ImageSegmentationContainer cont)
Generates the layer order.protected String[]
Sorted. doGenerate(ImageSegmentationContainer cont)
Generates the layer order.String[]
AbstractImageSegmentationContainerLayerOrder. generate(ImageSegmentationContainer cont)
Generates the layer order. -
Uses of ImageSegmentationContainer in adams.data.imagesegmentation.operation
Methods in adams.data.imagesegmentation.operation with parameters of type ImageSegmentationContainer Modifier and Type Method Description protected void
AbstractImageSegmentationContainerOperation. check(ImageSegmentationContainer[] containers)
Checks the containers.protected String
AbstractImageSegmentationContainerOperation. checkSameDimensions(ImageSegmentationContainer[] containers)
Checks whether the containers have the same dimensions.protected boolean
AbstractImageSegmentationContainerOperation. checkSameDimensions(ImageSegmentationContainer cont1, ImageSegmentationContainer cont2)
Checks whether the two containers have the same dimensions.protected abstract Object
AbstractImageSegmentationContainerOperation. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
CompareAnnotationWithPrediction. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
ConfusionMatrix. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
CountPixels. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
EvaluatePrediction. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
PassThrough. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.protected Object
SimpleOverlay. doProcess(ImageSegmentationContainer[] containers)
Performs the actual processing of the containers.Object
AbstractImageSegmentationContainerOperation. process(ImageSegmentationContainer[] containers)
Processes the containers. -
Uses of ImageSegmentationContainer in adams.data.io.input
Methods in adams.data.io.input that return ImageSegmentationContainer Modifier and Type Method Description protected abstract ImageSegmentationContainer
AbstractImageSegmentationAnnotationReader. doRead(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
AbstractPNGAnnotationImageSegmentationReader. doRead(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
IndividualImageSegmentationLayerReader. doRead(PlaceholderFile file)
Reads the image segmentation annotations.protected abstract ImageSegmentationContainer
AbstractPNGAnnotationImageSegmentationReader. doReadLayers(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
BlueChannelImageSegmentationReader. doReadLayers(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
GrayscaleImageSegmentationReader. doReadLayers(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
IndexedPNGImageSegmentationReader. doReadLayers(PlaceholderFile file)
Reads the image segmentation annotations.protected ImageSegmentationContainer
AbstractPNGAnnotationImageSegmentationReader. newContainer(PlaceholderFile file)
Creates a container with the base image and no layers.ImageSegmentationContainer
AbstractImageSegmentationAnnotationReader. read(PlaceholderFile file)
Reads the image segmentation annotations.ImageSegmentationContainer
ImageSegmentationAnnotationReader. read(PlaceholderFile file)
Reads the image segmentation annotations. -
Uses of ImageSegmentationContainer in adams.data.io.output
Methods in adams.data.io.output with parameters of type ImageSegmentationContainer Modifier and Type Method Description protected String
AbstractImageSegmentationAnnotationWriter. check(PlaceholderFile file, ImageSegmentationContainer annotations)
Hook method for performing checks before writing the data.protected String
AbstractPNGAnnotationImageSegmentationWriter. check(PlaceholderFile file, ImageSegmentationContainer annotations)
Hook method for performing checks before writing the data.protected abstract String
AbstractImageSegmentationAnnotationWriter. doWrite(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String
BlueChannelImageSegmentationWriter. doWrite(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String
GrayscaleImageSegmentationWriter. doWrite(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String
IndexedPNGImageSegmentationWriter. doWrite(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String
IndividualImageSegmentationLayerWriter. doWrite(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String[]
AbstractPNGAnnotationImageSegmentationWriter. getLayerNames(ImageSegmentationContainer annotations)
Returns the names of the layers to output.String
AbstractImageSegmentationAnnotationWriter. write(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.String
ImageSegmentationAnnotationWriter. write(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the image segmentation annotations.protected String
AbstractImageSegmentationAnnotationWriter. writeBaseImage(PlaceholderFile file, ImageSegmentationContainer annotations)
Writes the base image unless skipped. -
Uses of ImageSegmentationContainer in adams.flow.container
Methods in adams.flow.container that return ImageSegmentationContainer Modifier and Type Method Description ImageSegmentationContainer
ImageSegmentationContainer. getClone()
Returns a clone of itself. -
Uses of ImageSegmentationContainer in adams.gui.visualization.segmentation
Methods in adams.gui.visualization.segmentation that return ImageSegmentationContainer Modifier and Type Method Description ImageSegmentationContainer
SegmentationPanel. toContainer()
Turns the layers into a container.ImageSegmentationContainer
SegmentationPanel. toContainer(boolean useSeparateLayers)
Turns the layers into a container.Methods in adams.gui.visualization.segmentation with parameters of type ImageSegmentationContainer Modifier and Type Method Description void
SegmentationPanel. fromContainer(ImageSegmentationContainer segcont, SegmentationPanel.ContainerSettings contSettings, List<AbstractLayer.AbstractLayerState> lastSettings, LoggingObject logger)
Retrieves the layers from the container.void
SegmentationPanel. fromContainer(ImageSegmentationContainer segcont, String[] labels, boolean useSeparateLayers, ColorProvider colorProvider, float alpha, boolean allowLayerRemoval, boolean allowLayerActions, SegmentationPanel.LayerVisibility layerVisibility, List<AbstractLayer.AbstractLayerState> lastSettings, LoggingObject logger)
Retrieves the layers from the container.
-